Yamadazyma tenuis: 18247787
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Entry
18247787 CDS
T03099
Symbol
SWD2, PSN45_000487
Name
(RefSeq) member of Set1p complex, histone methyl transferase
KO
K14962
COMPASS component SWD2
Organism
cten
Yamadazyma tenuis
Pathway
cten03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cten00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
18247787 (SWD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cten03019
]
18247787 (SWD2)
03036 Chromosome and associated proteins [BR:
cten03036
]
18247787 (SWD2)
Messenger RNA biogenesis [BR:
cten03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
18247787 (SWD2)
Chromosome and associated proteins [BR:
cten03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
18247787 (SWD2)
COMPASS/SET1 complex (yeast)
18247787 (SWD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_WDHD1_1st
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
EIF3I
WD40_MABP1-WDR62_2nd
WDR55
ANAPC4_WD40
Beta-prop_TEP1_2nd
Beta-prop_SPT8
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
WD40_RFWD3
Cytochrom_D1
eIF2A
WD40_MABP1-WDR62_1st
DUF3726
NBCH_WD40
HTH_micro
WD_LRWD1
Motif
Other DBs
NCBI-GeneID:
18247787
NCBI-ProteinID:
XP_006687972
UniProt:
G3B8X7
LinkDB
All DBs
Position
1:984081..985100
Genome browser
AA seq
339 aa
AA seq
DB search
MPRKTFDYHSGASITSLNFDDSGQYLISAGIDKSIQLYDVHKGIHTKDIQSQKYGAHLAK
FTHKDLNCLYASTPEAVPQDEPIDHAIRYLSLSDKKYLRYFKGHKSQVVSLEVDPVHDMF
ITSSFDKSVKLWDLRTSNPTGSVEVGQPVLLAYDPHGIVFVTAKLPGYGGGDGVGELEFY
DTKNVHQVPFLRSTIHTRPECTWTNIEFANNGKYLLLSTNTSEHYLIDAFSGRLLTRLVM
QHPNYKLNSHYPVSHTSCFSSCGRYVIAGSSVSELSVFDLVGIQSSNGSATVKDSDNPST
LSPFKTISTNQGIPKLIAFNPKLFTVATADNSVTLWQPS
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgaaaaacctttgactaccatctgggtgctctgattacgtcgctcaatttcgat
gactcgggccagtacttgataagtgctggcatcgacaaatctatccaactttacgacgtc
cacaaaggaattcacacaaaggacatccaatcgcagaagtacggcgctcatcttgccaaa
tttacccacaaggacttgaattgtctctatgcatcgactcctgaggcagttccccaagat
gagcccattgaccacgccataagatacttgtcattgtccgataaaaagtatcttcggtac
ttcaagggccacaaaagccaggtggtgtccttagaggtggaccctgttcacgacatgttt
ataacctcgagtttcgacaagtccgtcaaactatgggatctcagaacctccaatccaact
ggaagtgtggaagtcggccaaccggttcttttggcgtacgatcctcatggcattgtgttt
gtaacagctaaactccccgggtatggcggaggtgatggtgtaggcgagttggaattctac
gatacaaagaacgtccaccaggtaccttttttgaggtctacaatccatactcggcctgag
tgtacgtggactaatatcgaatttgccaacaacgggaagtacttgttgctctccaccaac
accagtgaacactatttgatagacgcttttctgggacgtcttctcacccggttggtgatg
caacatccaaactacaaacttaattcccattacccggtgtcacacacctcgtgcttttct
tcgtgtggccggtacgtgattgccgggtcgtcggtgctggaattgctggtttttgatctc
gttggaatccagtcttccaacggttcagctactgtcaaggactcagacaatccgtccacc
ctctctccatttaaaaccatttccaccaaccagggcatccccaaactaattgcattcaat
cccaagcttttcacggtcgccactgccgacaactctgtcacgctatggcagcccagctag
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integrated database retrieval system
