Yamadazyma tenuis: 18248535
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Entry
18248535 CDS
T03099
Symbol
FIP1, PSN45_001263
Name
(RefSeq) cleavage polyadenylation factor subunit fip1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
cten
Yamadazyma tenuis
Pathway
cten03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cten00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
18248535 (FIP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cten03019
]
18248535 (FIP1)
Messenger RNA biogenesis [BR:
cten03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
18248535 (FIP1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Fip1
Med5
BSP_II
Motif
Other DBs
NCBI-GeneID:
18248535
NCBI-ProteinID:
XP_006690532
UniProt:
G3BDD9
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Position
2:37588..38379
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AA seq
263 aa
AA seq
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MAKSDDDDAYLYSSEDDGQPSTKKQKVNGTTKENPAKDDAAATRPSQSEDEDDDDDEEES
SDDDIDIVIGDNTTSTSRPSTASTSVTTAPTSESTESTTQPTSIVSNNQKESLDINKVVE
LDGKPLTQVDLEKLKDKPWRIPGADISDYFNYGFDEISWTAYCCKQDKLRGEFNPAKLMA
QIMGGSKGKNGPPMPPMGMPVPPPGMPMGMPPMGMMPNMPNMPNMANMPMPPNMPNMPNM
PNMPRNMNFGKSNLPPPPPPPKK
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagtcagatgatgatgacgcatacctatacagctctgaggacgatgggcaaccc
tccaccaagaagcagaaagtgaacggaaccaccaaagagaatcctgctaaagacgacgct
gcagccactaggccaagccaaagtgaagatgaggatgatgacgacgacgaagaagaaagc
agtgatgatgatattgatatcgttattggtgacaacaccacgtccacttccagaccatcc
acagcatctacgtcggtcacgacagcgccaacgagcgagtcgaccgagtctactacccaa
cccaccagtatcgtgtcaaataaccagaaagagtctttagatataaataaagtggtagaa
ttggatggaaagcccttaacacaagtggacttggagaaattgaaagacaagccatggaga
ataccaggggctgatatctctgactacttcaactacggattcgatgaaatcagttggact
gcttattgttgcaagcaagacaaattgagaggtgaattcaacccagctaaattgatggct
caaattatgggaggtctgaagggaaagaacggtcctcctatgccgccaatgggtatgccg
gtgccacctccaggtatgccaatgggaatgccaccaatgggtatgatgcctaacatgcct
aacatgcctaatatggctaatatgccaatgcctccaaacatgcctaacatgcctaacatg
cccaacatgccccgtaacatgaactttggtaagagcaacttgccaccaccaccaccgcct
cccaagaagtaa
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