Yamadazyma tenuis: 18248560
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Entry
18248560 CDS
T03099
Symbol
RPB2, PSN45_002956
Name
(RefSeq) DNA-dependent RNA polymerase II
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
cten
Yamadazyma tenuis
Pathway
cten03020
RNA polymerase
cten03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cten00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
18248560 (RPB2)
09124 Replication and repair
03420 Nucleotide excision repair
18248560 (RPB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cten03021
]
18248560 (RPB2)
03400 DNA repair and recombination proteins [BR:
cten03400
]
18248560 (RPB2)
Enzymes [BR:
cten01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
18248560 (RPB2)
Transcription machinery [BR:
cten03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
18248560 (RPB2)
DNA repair and recombination proteins [BR:
cten03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
18248560 (RPB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
RNA_pol_Rpb2_3
MRNIP
Motif
Other DBs
NCBI-GeneID:
18248560
NCBI-ProteinID:
XP_006683702
UniProt:
G3AW40
LinkDB
All DBs
Position
3:complement(1188721..1192422)
Genome browser
AA seq
1233 aa
AA seq
DB search
MSQDQVVEDQYAYDDDHSITPEDCWLVISSFFQEKGLVSQQLDSFDEFIETTIQELVWED
SHLVLDQPAQHTSEDDFENRRYEISFGKIYISKPTQTEGDGTTHPMFPQEARLRNLTYSS
PLYVDMTKRVFKSDDNDRKNNELEWIEEHVEGEGTDTKVYLGKVPIMLRSKFCMLRDLAE
HEFYELKECPYDMGGYFVINGSEKVLIAQERSAANIVQVFKKAGPSPISHVAEIRSALEK
GSRLISSLQIKLYGRDDRAASGRTIKATLPYIKEDIPIVIVFRALGIVPDGDILEHICYD
ANDWQMLEMLKPCVEEGFVIQEQEVALDFIGRRGVLGIRREKRIQYAKDILQKELLPNIT
QEEGFATRKAFFLGYMVNRLLLCALERKEPDDRDHFGKKRLDLAGPLLANLFRILFRKLT
RDIYNYMQRCVENDKEFNLTLAVKSQTITDGLRYSLATGNWGEQKKAMSSRAGVSQVLNR
YTYSSTLSHLRRTNTPIGRDGKLAKPRQLHNTHWGLVCPAETPEGQACGLVKNLSLMSCI
SVGTSSEPILVFLEEWGLEPLEDYSPSTSPDSTRVFVNGVWVGTHRDPSSLVETIRSLRR
KGDISPEVSIIRDIREREFKIFTDAGRVYRPLFIVDDNPYSETKGELMLNKSHVKKLMDS
EYDDYVYDDEQEAYGWSSLVRDGIIEYVDAEEEETIMIAMTPEDLESSKSTLSEAQQKSM
QMEEQEKDPAKRIKPTFSGNLHTFTHCEIHPSMILGVAASIIPFPDHNQSPRNTYQSAMG
KQAMGVFLTNYSVRMDTMANILYYPQKPLATTRSMEYLKFRELPAGQNAIVAIACYSGYN
QEDSMIMNQSSIDRGLFRSLFFRSYMDLEKRQGMKALETFERPSRSDTLRLKHGTYEKLD
DDGLITPGVRVSGEDIIIGKTTPIPPDAEELGQRTQYHTKRDASTPLRSTESGIVDQVLL
TTNGDGAKFVKVRMRTTKVPQIGDKFASRHGQKGTIGVTYRNEDMPFTSQGIVPDLIINP
HAIPSRMTVAHLIECLLSKVSSLSGLEGDASPFTDVTAEEVSKLLREHGYQSRGFEVMYN
GHTGKKLMAQVFFGPTYYQRLRHMVDDKIHARARGPVQVLTRQPVEGRSRDGGLRFGEME
RDCMIAHGAAGFLKERLMEASDAFRVHVCGICGLMSVIANLKKNQFECRACKNKTNIYQI
HIPYAAKLLFQELMAMNISPRMYTERSGISVRV
NT seq
3702 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaagatcaagtagtcgaggaccaatatgcttatgatgatgatcatagcattact
cctgaagattgttggttagtcatatcgtctttttttcaagagaaaggattggtatctcag
cagttggactcttttgatgagtttattgagacaaccattcaagagttggtatgggaggac
tctcatttggtgttagatcaaccagctcagcatacttcagaggacgactttgaaaacaga
agatatgagatttctttcggaaagatttatatttccaaacctacccaaactgaaggtgat
ggtacaacccaccccatgttcccacaagaagctagattgcgtaatttgacatattcgtcc
cccttatatgtcgacatgaccaagagagttttcaagtctgatgataatgaccgtaagaac
aatgagttggaatggatagaagaacatgtcgaaggcgaaggtactgatacaaaggtttat
ttgggtaaagtacccatcatgttaagatctaagttctgtatgcttcgtgatttggctgaa
catgagttttacgaattgaaagaatgtccttatgatatgggtggttattttgtgattaac
ggatctgaaaaagttttaattgcccaagaaagaagtgcggccaatattgtccaagttttc
aagaaagcgggtccgtctcctatttctcatgttgctgaaatcagatccgctttagagaag
ggatccagattgatttcatccttgcaaattaaattatatggtagagatgatagagcagcg
tcaggaagaacgatcaaagcaactttaccatacatcaaagaagatattcctatcgtgatt
gtgtttagagctttgggaatcgttccagacggtgatatattagaacatatatgttatgat
gcaaatgattggcagatgttggaaatgttaaaaccttgcgtcgaagaaggtttcgtgatt
caagaacaagaagttgcccttgattttattggaagaagaggtgtgttgggtatcagaaga
gaaaaacgtattcaatacgctaaagacattttacaaaaggaattgttaccaaacattact
caagaagaaggtttcgctacaagaaaggcttttttcttaggttacatggtcaacaggttg
ttattgtgtgctttggaaagaaaagaacctgacgacagagatcactttggtaagaagaga
ttggatttggcaggcccattgttggctaacttgttccgtattttgttcagaaaattgacc
agagatatttacaattatatgcaaagatgtgttgagaatgataaggaatttaacttaacg
ttggccgtgaagtctcaaactattaccgatggtttacgttattcgttggctactggtaac
tggggtgaacaaaagaaggccatgagttccagagctggtgtttcccaagtgttgaacaga
tatacctattcgtctacattgtctcacttaagaagaacaaacacacctattggtcgtgat
ggtaagctcgccaaaccaagacaattgcataacacccattggggtcttgtttgtcctgct
gaaacacctgaaggtcaagcctgtggtttagttaagaatctttctttgatgtcatgtata
tctgttggtacttcttctgaaccgattttagtctttttagaggaatgggggttggagcct
ttagaagactattcaccatctacgtctcctgattctaccagagtgtttgttaatggtgtt
tgggttggtactcatagagacccaagcctgttagtggaaactatccgtagtttaagaaga
aaaggtgatatttctcctgaagtctctattatcagggacatcagagaaagagaattcaaa
attttcaccgatgctggtcgtgtttaccgtccattattcatcgttgatgacaacccatac
agtgaaactaagggtgaattaatgttgaataagtcacacgttaagaaattgatggattct
gaatatgatgattacgtttatgatgatgaacaggaagcttacggttggagctccttggtt
cgtgacggtattatagaatatgttgatgctgaagaagaagaaaccattatgattgccatg
actcctgaagacttggaaagtagcaagagtaccttaagtgaagctcaacagaaatccatg
caaatggaagagcaagagaaggatccagcaaagagaattaaacccacattttcaggtaac
ttgcataccttcactcattgtgaaatccacccttctatgattttaggggttgccgcctcc
attattcctttcccagatcacaaccaatctcctcgtaatacttatcaatcggctatgggt
aagcaagctatgggggtgtttttgaccaattattctgtcagaatggatactatggctaat
attttgtattatcctcagaaaccgttggctacaactagatctatggaataccttaagttc
cgtgaattacctgctggtcagaatgccattgttgctattgcttgttattccggatacaat
caagaagattctatgattatgaaccaatcttccattgacagaggtttgttcagatctttg
ttctttagatcttatatggatttggaaaagagacaaggtatgaaagccttggaaaccttt
gaaaggccatcaagatctgatacgttgagattgaagcatggcacttatgaaaagttggat
gatgatgggttgattactcctggtgttagagtaagtggtgaagatatcatcattggtaag
accactccaattccaccagatgcagaagagttgggacagagaactcaataccacaccaag
agagatgcatctactcctttgagaagtactgaatctggtattgttgaccaggtgttactc
actactaatggtgatggtgcaaagttcgtcaaggtcagaatgagaactaccaaagtgcct
caaattggtgataagttcgcatccagacatggtcaaaaaggtactattggtgttacttac
aggaatgaagatatgccatttacatcccaaggaattgtgccagatcttattatcaatcct
cacgccattccatcgcggatgacagttgctcacttgattgagtgtttgttgtccaaagta
tcttctttatctggtttggaaggtgatgcctcaccatttactgatgttactgcagaagag
gtttctaaattgttaagagagcatggttaccaatccagagggttcgaagtcatgtacaac
ggtcatactggtaagaaattgatggcacaagtgttcttcggtcctacctactatcaaaga
ttgagacacatggtggacgacaagattcatgccagagctaggggacctgtacaagtcttg
accagacaaccggttgaaggtagatccagagatggtggtttgcgttttggagaaatggag
agagattgtatgatcgctcatggagctgctggattcttgaaagaaagattaatggaagca
tctgatgcttttagagtacatgtttgtggaatttgtggattaatgtcagttattgccaac
ctcaaaaagaaccaatttgagtgccgggcctgtaaaaataagaccaacatttaccaaatt
cacattccgtatgccgctaaacttttgttccaagagttaatggcaatgaacatttcacca
agaatgtacaccgaaagatcaggaatttccgttcgtgtataa
DBGET
integrated database retrieval system