KEGG   Yamadazyma tenuis: 18248560
Entry
18248560          CDS       T03099                                 
Symbol
RPB2, PSN45_002956
Name
(RefSeq) DNA-dependent RNA polymerase II
  KO
K03010  DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6]
Organism
cten  Yamadazyma tenuis
Pathway
cten03020  RNA polymerase
cten03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cten00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    18248560 (RPB2)
  09124 Replication and repair
   03420 Nucleotide excision repair
    18248560 (RPB2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cten03021]
    18248560 (RPB2)
   03400 DNA repair and recombination proteins [BR:cten03400]
    18248560 (RPB2)
Enzymes [BR:cten01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     18248560 (RPB2)
Transcription machinery [BR:cten03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     18248560 (RPB2)
DNA repair and recombination proteins [BR:cten03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      18248560 (RPB2)
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_2 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_5 RNA_pol_Rpb2_3 MRNIP
Other DBs
NCBI-GeneID: 18248560
NCBI-ProteinID: XP_006683702
UniProt: G3AW40
LinkDB
Position
3:complement(1188721..1192422)
AA seq 1233 aa
MSQDQVVEDQYAYDDDHSITPEDCWLVISSFFQEKGLVSQQLDSFDEFIETTIQELVWED
SHLVLDQPAQHTSEDDFENRRYEISFGKIYISKPTQTEGDGTTHPMFPQEARLRNLTYSS
PLYVDMTKRVFKSDDNDRKNNELEWIEEHVEGEGTDTKVYLGKVPIMLRSKFCMLRDLAE
HEFYELKECPYDMGGYFVINGSEKVLIAQERSAANIVQVFKKAGPSPISHVAEIRSALEK
GSRLISSLQIKLYGRDDRAASGRTIKATLPYIKEDIPIVIVFRALGIVPDGDILEHICYD
ANDWQMLEMLKPCVEEGFVIQEQEVALDFIGRRGVLGIRREKRIQYAKDILQKELLPNIT
QEEGFATRKAFFLGYMVNRLLLCALERKEPDDRDHFGKKRLDLAGPLLANLFRILFRKLT
RDIYNYMQRCVENDKEFNLTLAVKSQTITDGLRYSLATGNWGEQKKAMSSRAGVSQVLNR
YTYSSTLSHLRRTNTPIGRDGKLAKPRQLHNTHWGLVCPAETPEGQACGLVKNLSLMSCI
SVGTSSEPILVFLEEWGLEPLEDYSPSTSPDSTRVFVNGVWVGTHRDPSSLVETIRSLRR
KGDISPEVSIIRDIREREFKIFTDAGRVYRPLFIVDDNPYSETKGELMLNKSHVKKLMDS
EYDDYVYDDEQEAYGWSSLVRDGIIEYVDAEEEETIMIAMTPEDLESSKSTLSEAQQKSM
QMEEQEKDPAKRIKPTFSGNLHTFTHCEIHPSMILGVAASIIPFPDHNQSPRNTYQSAMG
KQAMGVFLTNYSVRMDTMANILYYPQKPLATTRSMEYLKFRELPAGQNAIVAIACYSGYN
QEDSMIMNQSSIDRGLFRSLFFRSYMDLEKRQGMKALETFERPSRSDTLRLKHGTYEKLD
DDGLITPGVRVSGEDIIIGKTTPIPPDAEELGQRTQYHTKRDASTPLRSTESGIVDQVLL
TTNGDGAKFVKVRMRTTKVPQIGDKFASRHGQKGTIGVTYRNEDMPFTSQGIVPDLIINP
HAIPSRMTVAHLIECLLSKVSSLSGLEGDASPFTDVTAEEVSKLLREHGYQSRGFEVMYN
GHTGKKLMAQVFFGPTYYQRLRHMVDDKIHARARGPVQVLTRQPVEGRSRDGGLRFGEME
RDCMIAHGAAGFLKERLMEASDAFRVHVCGICGLMSVIANLKKNQFECRACKNKTNIYQI
HIPYAAKLLFQELMAMNISPRMYTERSGISVRV
NT seq 3702 nt   +upstreamnt  +downstreamnt
atgtctcaagatcaagtagtcgaggaccaatatgcttatgatgatgatcatagcattact
cctgaagattgttggttagtcatatcgtctttttttcaagagaaaggattggtatctcag
cagttggactcttttgatgagtttattgagacaaccattcaagagttggtatgggaggac
tctcatttggtgttagatcaaccagctcagcatacttcagaggacgactttgaaaacaga
agatatgagatttctttcggaaagatttatatttccaaacctacccaaactgaaggtgat
ggtacaacccaccccatgttcccacaagaagctagattgcgtaatttgacatattcgtcc
cccttatatgtcgacatgaccaagagagttttcaagtctgatgataatgaccgtaagaac
aatgagttggaatggatagaagaacatgtcgaaggcgaaggtactgatacaaaggtttat
ttgggtaaagtacccatcatgttaagatctaagttctgtatgcttcgtgatttggctgaa
catgagttttacgaattgaaagaatgtccttatgatatgggtggttattttgtgattaac
ggatctgaaaaagttttaattgcccaagaaagaagtgcggccaatattgtccaagttttc
aagaaagcgggtccgtctcctatttctcatgttgctgaaatcagatccgctttagagaag
ggatccagattgatttcatccttgcaaattaaattatatggtagagatgatagagcagcg
tcaggaagaacgatcaaagcaactttaccatacatcaaagaagatattcctatcgtgatt
gtgtttagagctttgggaatcgttccagacggtgatatattagaacatatatgttatgat
gcaaatgattggcagatgttggaaatgttaaaaccttgcgtcgaagaaggtttcgtgatt
caagaacaagaagttgcccttgattttattggaagaagaggtgtgttgggtatcagaaga
gaaaaacgtattcaatacgctaaagacattttacaaaaggaattgttaccaaacattact
caagaagaaggtttcgctacaagaaaggcttttttcttaggttacatggtcaacaggttg
ttattgtgtgctttggaaagaaaagaacctgacgacagagatcactttggtaagaagaga
ttggatttggcaggcccattgttggctaacttgttccgtattttgttcagaaaattgacc
agagatatttacaattatatgcaaagatgtgttgagaatgataaggaatttaacttaacg
ttggccgtgaagtctcaaactattaccgatggtttacgttattcgttggctactggtaac
tggggtgaacaaaagaaggccatgagttccagagctggtgtttcccaagtgttgaacaga
tatacctattcgtctacattgtctcacttaagaagaacaaacacacctattggtcgtgat
ggtaagctcgccaaaccaagacaattgcataacacccattggggtcttgtttgtcctgct
gaaacacctgaaggtcaagcctgtggtttagttaagaatctttctttgatgtcatgtata
tctgttggtacttcttctgaaccgattttagtctttttagaggaatgggggttggagcct
ttagaagactattcaccatctacgtctcctgattctaccagagtgtttgttaatggtgtt
tgggttggtactcatagagacccaagcctgttagtggaaactatccgtagtttaagaaga
aaaggtgatatttctcctgaagtctctattatcagggacatcagagaaagagaattcaaa
attttcaccgatgctggtcgtgtttaccgtccattattcatcgttgatgacaacccatac
agtgaaactaagggtgaattaatgttgaataagtcacacgttaagaaattgatggattct
gaatatgatgattacgtttatgatgatgaacaggaagcttacggttggagctccttggtt
cgtgacggtattatagaatatgttgatgctgaagaagaagaaaccattatgattgccatg
actcctgaagacttggaaagtagcaagagtaccttaagtgaagctcaacagaaatccatg
caaatggaagagcaagagaaggatccagcaaagagaattaaacccacattttcaggtaac
ttgcataccttcactcattgtgaaatccacccttctatgattttaggggttgccgcctcc
attattcctttcccagatcacaaccaatctcctcgtaatacttatcaatcggctatgggt
aagcaagctatgggggtgtttttgaccaattattctgtcagaatggatactatggctaat
attttgtattatcctcagaaaccgttggctacaactagatctatggaataccttaagttc
cgtgaattacctgctggtcagaatgccattgttgctattgcttgttattccggatacaat
caagaagattctatgattatgaaccaatcttccattgacagaggtttgttcagatctttg
ttctttagatcttatatggatttggaaaagagacaaggtatgaaagccttggaaaccttt
gaaaggccatcaagatctgatacgttgagattgaagcatggcacttatgaaaagttggat
gatgatgggttgattactcctggtgttagagtaagtggtgaagatatcatcattggtaag
accactccaattccaccagatgcagaagagttgggacagagaactcaataccacaccaag
agagatgcatctactcctttgagaagtactgaatctggtattgttgaccaggtgttactc
actactaatggtgatggtgcaaagttcgtcaaggtcagaatgagaactaccaaagtgcct
caaattggtgataagttcgcatccagacatggtcaaaaaggtactattggtgttacttac
aggaatgaagatatgccatttacatcccaaggaattgtgccagatcttattatcaatcct
cacgccattccatcgcggatgacagttgctcacttgattgagtgtttgttgtccaaagta
tcttctttatctggtttggaaggtgatgcctcaccatttactgatgttactgcagaagag
gtttctaaattgttaagagagcatggttaccaatccagagggttcgaagtcatgtacaac
ggtcatactggtaagaaattgatggcacaagtgttcttcggtcctacctactatcaaaga
ttgagacacatggtggacgacaagattcatgccagagctaggggacctgtacaagtcttg
accagacaaccggttgaaggtagatccagagatggtggtttgcgttttggagaaatggag
agagattgtatgatcgctcatggagctgctggattcttgaaagaaagattaatggaagca
tctgatgcttttagagtacatgtttgtggaatttgtggattaatgtcagttattgccaac
ctcaaaaagaaccaatttgagtgccgggcctgtaaaaataagaccaacatttaccaaatt
cacattccgtatgccgctaaacttttgttccaagagttaatggcaatgaacatttcacca
agaatgtacaccgaaagatcaggaatttccgttcgtgtataa

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