Yamadazyma tenuis: 18248630
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Entry
18248630 CDS
T03099
Symbol
HDA1, PSN45_003506
Name
(RefSeq) Histone deacetylase hda1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
cten
Yamadazyma tenuis
Brite
KEGG Orthology (KO) [BR:
cten00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cten01009
]
18248630 (HDA1)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cten03019
]
18248630 (HDA1)
04131 Membrane trafficking [BR:
cten04131
]
18248630 (HDA1)
03036 Chromosome and associated proteins [BR:
cten03036
]
18248630 (HDA1)
Enzymes [BR:
cten01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
18248630 (HDA1)
Protein phosphatases and associated proteins [BR:
cten01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
18248630 (HDA1)
Messenger RNA biogenesis [BR:
cten03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
18248630 (HDA1)
Membrane trafficking [BR:
cten04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
18248630 (HDA1)
Chromosome and associated proteins [BR:
cten03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
18248630 (HDA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Arb2-like
Motif
Other DBs
NCBI-GeneID:
18248630
NCBI-ProteinID:
XP_066014193
LinkDB
All DBs
Position
4:927304..929862
Genome browser
AA seq
852 aa
AA seq
DB search
MSENHPEASVGRDKEISEQQITPGAGDVSNGIKRDVHHPDGIFSHVNNAQPSTNSVPDPS
IKAELQDDNGTRPVQDVEESDAKRIHLTEDVVKSETPIAGSDAEIVTSNGNGEVAANGNG
MLVVPKSGPQLFYTPLKTGLVYDVRMRYHAKIFTSYFEYIDPHPEDPRRIYRIYKKLAEA
GLITDPSLSGTDDLGPLMMKIPIREASDEEILLVHSEEHLKYIASTETMSRDKLLEETET
GDSIYVNNDSYLSAKLSCGGSIEACKAVISGQVKNSMAIVRPPGHHAEPDTPGGFCLFSN
VAVAAKTMLKLFPDSVRKIVIVDWDIHHGNGTQKAFYNDPRVLYISLHRYENGRFYPGTK
AGSHKMCGEEEGEGFNMNIPWRAPGTGDGDYVYAFNKLVIPVISEFDPDFIIVSSGFDAA
DGDIVGGCHVTPAGYGYMTHMLKGIARGKLSVILEGGYNLDSISKSALAVAKVLLGEPPE
STITQHPFLDTIEVVDEVIKTQSKYWTCLKPGNPSRSFDEVFELPEDVNGYKLTNINDPI
RSQQANHLFNLYSFINLPIVSNENDKFNPFTVDLPPRLEDLIVASPHIYDAPVVVVTVHD
PPDIWANVNSVNGNIEGNSSVVLEHPLIQIIEKIKKEQDDDASEDNKKIGYIDINIPSFT
LPVSSNGSLHLNKHSNASYGSYNPNIFAQELLLYVWDNYLSYFNKLTKLIFVGFGDAYQS
IVHLYAKRPSQEIKEIVKGTVCFVNRSTLKPLVPVMDESMIDWFYSNSVIFTSCLNPCWT
GNASSGSQANRNGSTVTTTDANGEIKRPRRKFGRVIRADVDGIWEVISERFDEGVDFILD
SIEDFEDSSASN
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaaaccacccggaagcctctgttggccgtgacaaggaaatatccgaacagcag
ataactcccggtgctggtgacgttagtaatggcatcaaaagagacgtccatcatcccgat
ggtatattcagccatgtcaacaatgctcaaccctcgaccaactcagtaccagacccgtcc
atcaaagcagagcttcaggacgacaacggcacaaggcccgtccaagacgtggaggaaagt
gacgccaaaagaatccatctcacggaggacgtcgtcaagtcggagactcctatagctggc
tctgatgccgaaattgttaccagtaacggcaatggagaagtggccgccaacggcaacggg
atgttggtggtgcccaagtcgggtccacagctcttttatactcctttgaaaactgggctt
gtgtacgacgtgaggatgagataccatgctaagattttcacgtcctacttcgagtatatt
gatccccatccagaagaccccagacgtatctacagaatctacaaaaagcttgctgaggcc
ggtttgatcaccgatccatcgttatcgggaaccgatgacttggggcctcttatgatgaag
attccaattagagaagcgtctgatgaggagatcttgttggtacactccgaagaacacttg
aagtatattgcctcgactgagacgatgtcacgcgataagctacttgaagaaacagagacg
ggggattcgatatatgtcaataacgactcgtacttgtcggcaaagttgtcgtgtggtgga
agtattgaggcttgtaaggcagttattagcggacaggtgaaaaattctatggcaattgtt
cgtcctccaggacaccatgcagaacctgacacccctggaggtttttgtctcttcagtaac
gtggcggtggccgctaagaccatgttaaagttgttcccagactcggtacgaaaaattgtc
attgtcgattgggatatccaccatggtaatgggacccaaaaggccttctacaatgacccg
agagttttgtatatatcacttcatcggtatgaaaacggccggttttatcctggcaccaaa
gctggtagccacaaaatgtgtggagaagaggaaggtgaaggctttaatatgaacattcct
tggagagctcctgggactggggatggtgattatgtctatgcttttaataagttggtgatc
ccagtgatttcagaatttgatcctgattttatcattgttagttcaggtttcgatgcggcc
gatggggacattgtgggtgggtgtcatgttaccccggctgggtatggatatatgacacac
atgttgaaaggtattgccagaggtaagctatcggtgattttggagggaggttacaatctt
gattccatcagtaaaagtgctttggcagtggctaaagtattacttggagaacctcccgaa
tccaccatcacacaacatcctttcttggatactattgaggttgttgatgaggtcattaag
actcaatccaaatattggacgtgcttgaaaccaggaaacccaagcagatctttcgatgag
gtctttgagctaccagaagatgtcaatggctataagttgaccaacattaatgatcctata
cgatctcaacaggccaaccacttattcaatttgtactcattcatcaacttgccaattgtg
tcgaatgagaacgacaagtttaacccattcactgttgaccttccacctcggttggaggat
ttgattgttgcaagtcctcatatatatgatgcccctgttgtggttgtgactgtccatgat
cctccagatatttgggccaatgtgaactcagtaaatgggaatattgagggtaactcttca
gttgttttagagcaccctttgatacaaatcattgaaaagatcaagaaagagcaagatgat
gatgccagtgaagacaacaagaagattggatacatagacattaacattccatcgttcact
ttgccagtgtccagtaatgggtctttacacttgaacaaacattccaatgcctcatatggt
tcttacaatccaaacatctttgctcaagaacttttgttgtacgtttgggacaactattta
tcttatttcaacaagttaaccaaacttattttcgttgggttcggtgatgcgtaccagtcc
attgtacacctttatgccaaaagaccctcacaagaaattaaggaaatcgtcaaaggaact
gtttgttttgtcaataggtctactttgaaacctttagtaccagtgatggatgagtcaatg
attgattggttctactcgaattctgttattttcaccagttgtttaaatccttgctggaca
ggaaatgcttcgagtggatcccaagccaatagaaatggctcgactgtgacaaccacagac
gcaaacggtgaaataaagagaccaagaagaaagttcggtagagtcataagagctgatgtc
gatggtatctgggaagtcatcagtgaacggtttgatgaaggagtggatttcattttggac
tccattgaagatttcgaagatagcagcgcctcaaattaa
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