Yamadazyma tenuis: 18248697
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Entry
18248697 CDS
T03099
Symbol
SSL2, PSN45_002609
Name
(RefSeq) DNA repair helicase RAD25
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
cten
Yamadazyma tenuis
Pathway
cten03022
Basal transcription factors
cten03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cten00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
18248697 (SSL2)
09124 Replication and repair
03420 Nucleotide excision repair
18248697 (SSL2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cten03021
]
18248697 (SSL2)
03400 DNA repair and recombination proteins [BR:
cten03400
]
18248697 (SSL2)
Enzymes [BR:
cten01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
18248697 (SSL2)
Transcription machinery [BR:
cten03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
18248697 (SSL2)
DNA repair and recombination proteins [BR:
cten03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
18248697 (SSL2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
Motif
Other DBs
NCBI-GeneID:
18248697
NCBI-ProteinID:
XP_006684933
UniProt:
G3AZV1
LinkDB
All DBs
Position
3:complement(477264..479753)
Genome browser
AA seq
829 aa
AA seq
DB search
MSRRNKTVNYNELNNGNFSDVSISDEEDGDYTSSKKRPSPSQSAPERKRKPEQSIEALKA
SLSNKDFDEDDLIQLTPDIPQDYVPDAVSKTFGKSDFSYLRLKPDHFSRPIWISPKDGRI
ILESFSPLAEQAQDFLITIAEPVSRPSHIHEYKITPYSLYAAVSVGLETDDIIQVLNRLS
KVPVAESITNFIKGATVSYGKVKLVLKNNRYFVESAQADVLQMLLKDPVIGPLRINSEST
VDSNGLVKLAAPTQGDLKIAGSSNKPDDNKNKDTTEDIFASVVGNKTSEEDFDDDMDTVH
SFEIANDSVEIIKKRCQEIEYPVLEEYDFRNDQRNPDLEIDLKPSTQIRPYQEKSLSKMF
GNGRARSGIIVLPCGAGKTLVGITAACTIRKSVIVLCTSSVSVMQWRQQFLQWSTIQPES
VAAFTSENKEMFSTDAGLVVSTYSMVANTRARSYDSQKVMDFLTSREWGFIILDEVHVVP
AVMFRRVVTTIAAHSKLGLTATLVREDDKIYDLNFLIGPKLYEANWMDLAQKGHIANVQC
AEVWCPMTSEFYQEYLRETSRKKMLLYIMNPTKFQACQFLIHYHEKRGDKIIVFSDNVYA
LQEYALKLGKPFIYGATSQQERMKILQNFQHNDQVNTIFLSKVGDTSIDLPEATCLIQIS
SHYGSRRQEAQRLGRILRAKRRNDEGFNAFFYSLVSKDTQEMYYSTKRQAFLVDQGYAFK
VITHLNGMEQLPNLAYSTARERRELLQEVLLKNEDAAGLEIGDDADTTFAREGRIKTEGS
SSVKSAGSLAGLAGGEDMAYLEYGKNKNKEIRQQRNPLINKLYYSKKKS
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atgtcacggaggaacaaaacagtcaactacaacgagctcaacaacgggaacttctcggac
gtctcgatctctgacgaagaggacggtgattacacttccagcaagaagaggccttctccc
agtcagtctgcacccgagagaaagagaaaaccagaacaaagcatagaagcactcaaggcc
agtctaagcaacaaggactttgatgaagacgacttgatccaattgacgccggatattcct
caggactacgtgcccgatgcggtttccaagacgtttggaaagtcggacttttcatatctc
aggttaaagcctgaccatttctccagacccatatggatctctcccaaggatggacggatc
atcttggagtcgttctcccccttagccgaacaggcacaagacttcttgatcacaattgcg
gagccggtgtcaaggccttcccacattcatgaatacaaaatcacaccttattcgctttat
gctgctgtgtcagtgggattggagacagatgatattatccaggtgcttaatagactctca
aaggttccagtagcagagtccatcaccaacttcataaagggggccactgtttcgtacggg
aaggtcaagttggtgttgaagaataatcgatatttcgtcgaaagtgcacaagcagacgtg
cttcagatgcttttgaaggacccggtgattggccccttgcgaatcaacagtgagagtact
gtcgattctaacggccttgttaagttggctgctcctactcaaggtgacttgaagattgcg
ggttctagcaacaagccagatgacaacaagaataaggatacaacagaagatatatttgca
tcggtggtagggaacaaaacgtcagaggaggactttgacgacgacatggacacagtgcac
tcatttgaaattgccaacgactcggtggaaatcatcaagaaacgatgtcaggaaatcgaa
tacccggtgttggaagagtacgatttcagaaacgatcagagaaaccctgacttggaaatc
gatctcaaaccctccacccaaatcaggccctaccaagagaaatcgttgtcaaagatgttt
ggtaatggcagagcccgttcgggaatcatcgtgctaccttgcggtgccggtaagacgttg
gttggaattactgctgcttgcaccattcgaaagtcggtgattgtgttgtgcacctcatca
gtgtcggtgatgcaatggagacagcagtttttgcagtggagtactatacagccggagtcg
gtggccgcgttcacgtcggagaacaaggagatgttttcgaccgatgctgggttggtggtt
tcgacttattcaatggttgcaaacacccgagccaggtcctatgactctcaaaaggtgatg
gactttcttacttcaagagaatgggggttcatcatcttggacgaggtgcatgtggtaccg
gctgtgatgttcagaagagttgttaccactattgcagcccactcgaaacttggtttaacg
gctactttggtgcgggaagatgacaagatttatgacttgaactttttgattggccccaag
ttgtacgaagccaactggatggatttggcacaaaagggccacattgccaacgttcaatgt
gctgaggtgtggtgtccaatgacgtcggaattttatcaagaatacttgagagaaacgtcg
aggaagaagatgttgttgtatatcatgaaccccacgaaattccaggcatgccaattctta
attcactatcacgaaaagagaggtgataaaatcattgtgtttagtgataacgtgtatgcc
ttacaggagtatgcgttgaagttgggaaaaccttttatctatggtgcaacttcacaacaa
gaacggatgaagatcttgcagaactttcagcacaatgaccaggtcaacacaattttcttg
tccaaggtgggtgacacttcgatcgatttgccagaagccacctgcttgatccagatctca
tctcactatgggtctcgtagacaagaagctcagagattgggtagaatcttaagagcaaag
agaagaaatgacgaagggtttaatgccttcttctactcattggtgtctaaggatacccag
gaaatgtactattcgaccaagagacaagcgttcttagtggaccaagggtatgccttcaag
gttatcactcatttgaatggaatggagcaattgcccaatttagcatattcaactgcacga
gaacgtagggagttgcttcaagaagtgttgttaaagaatgaggatgctgctgggttggag
attggtgatgatgctgatacaaccttcgcccgggaaggtagaatcaagaccgaaggtagc
agctctgtcaagagtgccgggtctttggcaggattggctgggggtgaagacatggcgtat
cttgagtacggtaagaacaaaaacaaggagattaggcagcagcggaatccgcttatcaac
aagttgtactattctaagaagaagagttaa
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