Yamadazyma tenuis: 18248713
Help
Entry
18248713 CDS
T03099
Symbol
UFD4, PSN45_002512
Name
(RefSeq) Ubiquitin fusion degradation protein 4
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
cten
Yamadazyma tenuis
Pathway
cten04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cten00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
18248713 (UFD4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cten04121
]
18248713 (UFD4)
Enzymes [BR:
cten01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
18248713 (UFD4)
Ubiquitin system [BR:
cten04121
]
Ubiquitin ligases (E3)
HECT type E3
18248713 (UFD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
F-actin_cap_A
HECT
Motif
Other DBs
NCBI-GeneID:
18248713
NCBI-ProteinID:
XP_066013984
LinkDB
All DBs
Position
3:complement(join(284091..284874,284989..289958))
Genome browser
AA seq
1917 aa
AA seq
DB search
MSRRSKEANTNPSTDSDMYEAEDLHGGYKSDGVDDSILRLSEQARKRPSRDASDDGSDVM
SQEEQDYEGAQTSSQNDDAYEEDEEGDEEDDYQEEYDFGEDEDEAQAVRFLGSLARASQS
GNTGTQEQADDNDNDEDEGDGDEDSGTDSGYPRADLLRALGSFSNIRGGGSGTQSSFADV
IQRLVGEGFVSPYGGQNNEIDTLINGLGQRDDPFILSESLNQLGEKLLMMNAITAERVIP
ASKLTRSIISIMNDPFLSDQLELQLVACRCLYNLMEVNLDFIHDVVNNEGIEAVCIKLNE
ITFIDLTEQALQTLEMISRDPISHNLIISNNGLRACMQYLDFLTIHSQRKCLLIVANVCT
NISANNFDKINEVFDNISGVVKNHTDPNVIEHAWLSISRIISSFKSHPSKLETLFVTRVD
LLIEVVATIVVSSNKSSVSDSNDSHKVPVSFSSCLSLVKSLIVLASTSVKISAILFRDVS
IGECVVKAINKFSKNKEDLKNRGLSVISSSSFKDNISIEAIMAAPNELLSQFLTLIGYLL
PINYGPQETPFLKNSHLEFEEKIEINQQRTQICRDTMPEAFWKFVNDIWSFLINSFQALM
DFEVRRRILINLFRIVKFMQPDDFKKINGIEMVSALLASIVNQNKFTILKDFNNSVPASQ
QDTEMKTSDDEDSDESEDENVNDPNAGSKNQDNTAKLNANTLVWSSCLIVLNLIKIEPQI
FIDSFEKEGLIKDISTIANHLKFISTSDPINDDYEASRPFLSMYSYKYADIEFSKDYEYK
LTSMKIYSKLFHILMAIDELYVNSKEGSIAQVSSVAVEVSNEIEGLLKAQDLSRFPFSKW
QESWEKFQLLLDNGSQSVSSFELVSSGIIQALNDVFKIDALGSQDSLCYISFISVFFRRN
SQGNALISILVDKLQEALSRVESFEVISAGTSNQGLNLRFSSSNYYDSSQTAGMAKQIKL
KLGTDPSDTSSASQLPPTMQNMVLSVHAIASFASVSTFLTQRINFFEALTGSRRNRLNSD
VSEDVEDLDEEDIDDNNEVIGDADLNRDESNKTGKQTHIEFLINDEVIPNGTTIYGAIYR
SLQSEPDEIVESSRIWNSVHQVSFRVVDTPVESPTNDLILYNSNKSYNELKSYDATTINI
LNLLKVLFEVNVYAQTLKYEPLSIEKFMSWKLTVKLNRQLEEPLIVASGTLPGWAIHVTR
QYPFIFPLDTRIFFLQSTSFGYSRLIHQWQIRSNQENENINGHGSQSQRPQLGRPLRHKV
RISRKLILQSALKVLNLYGTSPGVLEIEYFDEVGSGLGPTLEFYSSVSKEFSKRKLRLWR
DDDPDGDEEDFVDYKTGLFPSPIDMNEIQTENGKKKLYFFRMLGKFIARTLLDSRIIDFR
FNPLFLKLVQIFNEHSMNKEGFSDLKKINNLNSLRIVDPSLADSLEHLMKYVELYKNVPE
HERDSILVDNCTLEDLSLSFSLPGYPSYQLIADGDNIAITSKNIESYISKVIEATLCNGI
IPQTKAFMNGFSKVFPISSLIVFSPNELVNLFGNAVEDWSLETLHSSINANHGYSKDSDA
VRTLIDILVHFNDIERRSFLQFLTGAPKLPVGGFKALKPEFTVVRKYPEGGSKDDDYLPS
VMTCANYLKLPNYSTEEIMKRKILQAISEGAGAFLLSSVNLESLVSSLVKSVPPGELKGA
KDDLSTILSDDNRLINSSIEQYINETGAVVSGAYVASKYNKHSGSSKYIDFVGRQLFNVD
IDTQKAIDLEDYSPTEEYPSYFDDLVEQLEQYGEDHYPSTYAYTIVPKGDEVFVIIIGQR
LNNDNYYTGQWNSTYVIKNGTIKGDIKVDIHYFEDGNVRLNYDESTSGQISASAKNIINF
INSSENKTTLKIVDNFNELNQRYFKNLRRLLPVTRSKIHWGNAIGNYRLGSDVVNKQ
NT seq
5754 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgaagatcaaaggaggcaaatactaatccttctacagactcagacatgtatgag
gccgaggacttacatggtggctacaagtccgacggtgtggatgactctattctacgtttg
tccgaacaggcccgaaaacggccatctcgtgatgcatccgatgacggctcagacgtcatg
tcacaagaggaacaagactatgagggtgcacagactagcagccagaacgacgatgcctat
gaagaagatgaagaaggtgacgaagaagatgattaccaggaagagtacgattttggtgaa
gacgaagatgaagctcaggctgttagattcttgggtagtttggcccgcgcttcacaaagt
ggaaacaccggcactcaggaacaagctgacgataatgataatgacgaagatgagggagac
ggggacgaagattcaggaaccgactccggctatccccgtgcagaccttttgagagctctt
ggctcattttccaatataagaggtggtggttcaggaacacaactgtccttcgccgatgtg
attcaaagattggtgggtgaagggtttgtttcaccatatggagggcaaaacaacgagatc
gataccttgattaacggtttgggccaaagagatgatccgtttattctctccgaatctttg
aaccaacttggtgaaaagctcttgatgatgaacgccatcaccgccgaaagagttatacct
gctagtaagttaactaggtccatcattctgatcatgaacgacccgtttctcctggatcag
ctagagttacagcttgtcgcatgtcgctgtttgtacaacttgatggaagtcaatctagat
ttcatccatgatgtggtgaataatgaaggaatagaggccgtttgcatcaaattaaacgaa
atcaccttcattgacttgactgaacaggcattacagactctcgagatgatttcacgagat
cccatttcccataacttgattatctccaataatggtctcagggcgtgtatgcaatatctt
gatttcttgaccattcattcccaaagaaagtgtctcttaattgttgccaatgtttgcaca
aacatttcagccaacaatttcgataagataaatgaggtatttgacaacatatcaggagtg
gttaagaatcatacggatccaaatgttatagagcatgcgtggttatccatctcccgtata
atttccagcttcaagtctcatccatcgaaattggagaccttattcgtgactagagtcgat
ttattgatcgaagtcgttgctactattgtcgtcagctccaacaaatcttctgtttcggat
tcaaatgactcgcataaagttcccgtgagcttcagctcatgcttaagcttggtgaaatct
ttgatagtcttggctagtacgagtgtgaagatctctgcaattcttttcagagatgtttcg
attggtgaatgcgtagtcaaagccatcaataaattttcaaagaacaaagaagacttgaag
aacagaggtttaagtgtcatcagttcttcttctttcaaagataacatatccattgaagca
atcatggcggctcccaatgagttgttatctcaattcctcaccttgattggctacttactt
ccaataaactatgggcctcaagaaacccctttcttgaagaacagtcatctagaattcgaa
gaaaagatcgaaatcaatcaacaaagaactcaaatctgcagagatactatgcccgaagca
ttttggaaatttgtcaacgatatatggtcttttttgatcaatagcttccaagcattaatg
gacttcgaagtcagaaggagaatcttgatcaatttattccgcattgtgaagttcatgcaa
cctgatgacttcaagaaaattaacggcatagaaatggtgtctgctttattggcctctatt
gtgaatcagaacaaattcacgattttaaaggatttcaataactcggttccagcaagccaa
caggatactgaaatgaaaaccagtgatgacgaagactcagacgaatcagaagacgaaaac
gtcaatgacccgaacgctggttccaagaatcaagataacacagccaagttaaatgccaat
actcttgtatggagctcttgcttgattgttttgaacttgattaagattgaaccccaaatc
ttcattgattcttttgaaaaagaaggtttgatcaaggacatttccactattgctaatcat
ttaaagttcattagcactagcgaccctattaacgacgattatgaggcatcaagacctttt
ctttcgatgtactcgtacaagtatgcagatatagagttctctaaggactatgagtacaag
ctcacaagtatgaagatttacagcaagttgtttcatatactcatggccatagacgagcta
tatgtgaacagtaaggaaggtagcattgcacaagtatcctctgttgcagttgaagttctg
aacgaaatcgaagggttattaaaggctcaagacttatcaagatttccatttagcaagtgg
caagagtcatgggaaaagttccaattacttttggataatggatctcaaagtgtttccagt
tttgagttggtatcgtctggtatcattcaagccttgaatgatgtgttcaagattgatgct
cttggttctcaagacagcctatgctatatttcctttatatctgtgtttttccgcagaaac
agccagggtaatgccttgatctccattcttgttgacaagttacaagaggcattgtcaaga
gttgagtcctttgaagtaatctctgctggtaccagcaatcaaggcctcaatttgaggttc
tcttcatcaaactattatgatagttctcaaacggctggtatggcaaaacaaatcaagttg
aaattgggtactgacccttctgatacctcttctgccagtcaattgccaccaacaatgcaa
aatatggttctttctgttcacgctatcgcttcatttgcctctgttagcacgttcttaact
caaagaatcaatttcttcgaggcattaactggttctagacgtaacaggcttaatagtgat
gtttctgaagatgttgaagacctcgatgaagaggacatagatgataacaatgaggtgatt
ggagatgcagacttaaacagagacgaatccaacaagacaggaaaacaaacacacattgag
ttcttgatcaatgacgaagtaatccctaatggcactaccatatatggggctatctacaga
tcactccaaagtgaacccgatgagattgtcgagtcttcaagaatttggaatagtgttcat
caggtttctttccgtgtggtggacacccctgttgaaagtcctacaaatgacttgatattg
tataattcgaacaaaagttacaatgaattgaagtcttatgatgctacaaccatcaacatc
ttgaatttactcaaggtcttgtttgaagtgaatgtatatgctcagacattgaaatatgag
ccgttgtctattgaaaaattcatgagttggaagcttacggtcaaattgaacagacaattg
gaagaacctttaattgttgcaagtggtactctaccaggatgggctattcatgtcactagg
caatatccctttattttcccattagacacaagaatattcttcttacaatccacctccttt
ggctattcaagacttatacatcaatggcagatcagatctaaccaagagaacgaaaacatt
aacggtcatggcagccaatctcaaagaccgcaactaggaagacctttgagacacaaggtt
agaatttcccgaaagttgattttacagagtgctcttaaggtgttgaacttgtatggtacc
agcccgggagttttagagatcgagtattttgatgaagttgggtcaggattgggaccgact
ttggagttctattcgagcgtctcaaaagaattctcaaagagaaagttgaggttatggaga
gatgacgaccctgatggtgatgaagaagattttgttgattacaagactggattattccct
tctccaatcgacatgaatgaaatccaaacggaaaacggaaagaaaaaactttactttttc
cgtatgttgggtaagttcattgccagaaccttattggactctcgaatcatagactttagg
ttcaacccacttttcctcaagctcgtgcaaatcttcaatgaacactccatgaacaaagaa
ggcttcagtgatttgaagaaaatcaacaacttaaacagtcttaggattgttgatccgtca
ttggcagattcattagagcatttgatgaaatacgttgaactctacaagaatgttcctgaa
catgaaagagacctgattcttgttgataactgtactttggaagacttgtcattgtcattt
tcgttgccaggttaccctagttatcagttaattgccgatggagataacatcgctattacc
tcgaagaatattgaatcgtacatcagcaaagtcattgaagctaccttatgcaatggtatt
attccacaaacaaaagcgttcatgaatggattctctaaagttttccccatcagctctttg
attgttttctcacccaatgaattggtaaacctctttggaaatgcggtagaggattggtct
ttggagacattacactcatccatcaatgccaatcatggctattccaaggattcagatgct
gtcagaacccttatcgatattcttgtgcactttaacgatattgaaagacggtccttttta
cagtttctaacaggagctccaaaacttcctgtgggaggatttaaagcgttgaaacctgaa
tttacagtggttagaaagtaccctgaaggtgggtctaaagatgacgactatttacccagt
gtcatgacctgtgccaactacttgaaattacctaactattccaccgaagaaatcatgaag
cgaaagattctccaagccatcagtgaaggtgctggggcctttttattatcctccgtcaac
ttggagagtttggtatcttccttggtgaagagtgttcctcccggggaattgaagggagcc
aaggacgatttatcgaccattttatccgatgacaacagactcatcaactcctcaattgaa
cagtacataaacgaaacgggtgctgttgtatctggggcctatgtcgcatccaaatacaac
aaacatctggggtcctcaaagtacatagactttgtgggaagacaattgttcaacgtggac
attgacacccaaaaagccattgatcttgaagactattcgcctaccgaagagtacccttcg
tatttcgatgatttggttgaacagttggaacagtatggagaagaccattatccttccaca
tatgcctacaccattgttcccaaaggcgatgaggtctttgtaatcatcattggtcaaaga
ctaaataacgacaattactatacgggacaatggaattctacgtatgtgatcaagaacggc
accataaagggagatatcaaggttgacatccactactttgaggacgggaatgtcaggttg
aactacgacgagtctaccagtggtcagatcagtgcttctgctaaaaacatcatcaacttt
attaacagttctgagaacaaaaccaccttgaaaattgtggacaacttcaacgagttgaac
caacggtacttcaagaacttgagaagacttttaccggtgacgaggtccaagattcactgg
ggaaatgccattggaaactacagattgggatctgatgtcgtcaacaaacagtag
DBGET
integrated database retrieval system
