Yamadazyma tenuis: 18248809
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Entry
18248809 CDS
T03099
Symbol
PSN45_005179
Name
(RefSeq) Prp19-domain-containing protein
KO
K10599
pre-mRNA-processing factor 19 [EC:
2.3.2.27
]
Organism
cten
Yamadazyma tenuis
Pathway
cten03040
Spliceosome
cten04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cten00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
18248809 (PSN45_005179)
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
18248809 (PSN45_005179)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cten03041
]
18248809 (PSN45_005179)
04121 Ubiquitin system [BR:
cten04121
]
18248809 (PSN45_005179)
03400 DNA repair and recombination proteins [BR:
cten03400
]
18248809 (PSN45_005179)
Enzymes [BR:
cten01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
18248809 (PSN45_005179)
Spliceosome [BR:
cten03041
]
Complex B
Other components
Prp19 complex
18248809 (PSN45_005179)
Complex C
Prp19-CDC5 complex
18248809 (PSN45_005179)
Ubiquitin system [BR:
cten04121
]
Ubiquitin ligases (E3)
U-box type E3
18248809 (PSN45_005179)
DNA repair and recombination proteins [BR:
cten03400
]
Eukaryotic type
Other factors with a suspected DNA repair function
PSO4 complex
18248809 (PSN45_005179)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Prp19
WD40_Prp19
Beta-prop_IFT122_1st
Beta-prop_EML_2
WDR55
U-box
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
Beta-prop_WDR36-Utp21_2nd
WD40_CDC20-Fz
Beta-prop_NOL10_N
FBA_2
EIF3I
BBH37
T15H9_4_N
LcrG
Motif
Other DBs
NCBI-GeneID:
18248809
NCBI-ProteinID:
XP_006685638
UniProt:
G3B0X5
LinkDB
All DBs
Position
7:join(786081..786093,786152..787566)
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AA seq
475 aa
AA seq
DB search
MFCALSGEVAKEPVLSPRSGKIFDRKLITTYVSTNNKDPITDEPLGVEELIAINVEDRTV
VPPKPPSFNSIPSLLTTFQNEFDSMALEIFSLRKSLHKARQELSSALYNYDAAVKVAANA
IKERDDVKTALQELTLSIGNDAMGEEDHENGSNGLDVAVPVQEIEAARQELFQQHKTQKV
SLPAADDVSIIFEGDVSIKKYNAFFFDERVQKLLVSSGKETTTLDLVTKTNTVATQKGVV
QHVSYIEFEGLVVPVFASKKQIKFEGITIKFRDEIVDIQPHPKLKNIYAVVCTKSWSLNV
GDKKCLFVQLDNEYTATTGSFHVDGALMAIGTTSGTVLVYGVADGSVASTLEIKYPTVDK
VQFGLNGYWLFVSSSDKSAHSLQVFDLRNHSVVHTIDFEELNDFAIDQSCSLLLTCNSKE
ISFHKYTKKGKTWNDFFKSVEVESTRNLVITKFENGVIHGVQLGDSIKNFKIEFN
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgttttgtgcactttcaggagaagtggccaaggagccggtgctttcacccaggagtggt
aagatctttgacagaaaacttatcaccacctatgtgtcaaccaacaataaagatccaata
actgatgaaccattgggagtggaagaactcattgccatcaatgtcgaagaccgaacagta
gtaccacccaagcctccgtcgttcaactcgattccatcacttcttacgactttccaaaat
gaatttgactctatggcgcttgagatattcagcttgagaaagctgttgcacaaagcccgt
caagaacttagctcggccttgtacaactacgatgccgccgtgaaggtggccgccaacgct
attaaggaacgggatgatgtcaagaccgctcttcaggagttaacattgtccatagggaac
gatgcgatgggagaagaggatcatgaaaatggctccaacggcttggatgtggcagttcct
gttcaggaaatagaggctgcaaggcaggagctcttccaacaacacaaaactcagaaggtt
tcgttgccggcggctgacgatgtgagtatcatttttgaaggagatgtttcgatcaaaaag
tacaatgccttcttctttgatgaacgagtgcagaaattgttggtcagtagtggtaaggaa
accactactttagacttggtgaccaagactaacactgtggccactcaaaaaggggttgtg
caacatgtaagttatattgagtttgaaggtttagtggtgcctgtgtttgcaagcaaaaaa
cagatcaagttcgagggaattacaatcaagtttcgggacgagatagtcgacatacaacca
cacccgaagttgaagaacatctacgctgttgtgtgtaccaagtcgtggtctttgaatgtg
ggtgacaaaaagtgtttgtttgtgcagttggacaatgaatacactgcgaccaccggcagt
ttccatgtcgatggagccttgatggccattggaaccacctctgggaccgtcttagtgtat
ggagttgctgatgggtctgtggcttccactttggaaataaagtatccgacggtggataag
gtccagtttggtttgaatggatactggctctttgtatcatccagtgataaatccgctcac
agcttgcaagtttttgacttgaggaatcactcggttgttcacaccatcgactttgaagag
cttaatgacttcgcaattgaccaatcatgctctttactattgacttgcaacagtaaggag
atcagtttccataagtatactaagaaagggaagacttggaatgatttcttcaagagcgtt
gaagtggagtctacgaggaacttggtgatcacaaaatttgagaatggagtgattcatgga
gtgcagttgggggattccatcaagaacttcaagatcgagttcaattaa
DBGET
integrated database retrieval system
