Yamadazyma tenuis: 18249037
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Entry
18249037 CDS
T03099
Symbol
prp1, PSN45_000325
Name
(RefSeq) U4/U6 X U5 tri-snRNP complex subunit Prp1
KO
K12855
pre-mRNA-processing factor 6
Organism
cten
Yamadazyma tenuis
Pathway
cten03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cten00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
18249037 (prp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cten03041
]
18249037 (prp1)
Spliceosome [BR:
cten03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
18249037 (prp1)
Complex C
U5 SnRNP specific factors
18249037 (prp1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PRP1_N
TPR_14
HAT_Syf1_CNRKL1_N
TPR_19
HAT_PRP39_N
Suf
HAT_PRP39_C
TPR_16
TPR_2
ARM_TT21_N
T7SS_EccA1_N
TPR_1
Motif
Other DBs
NCBI-GeneID:
18249037
NCBI-ProteinID:
XP_006687813
UniProt:
G3B7L2
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Position
1:complement(644460..647084)
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AA seq
874 aa
AA seq
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MDRKAFLDQEAPAGYVAGVGRGATGFVTSADAGGLRSVRPFEPSDSEDDNGDNNSLGLLG
GQSKDDEEADRVYDEVERRLQKRHKNTSQLEVVQQDEENQIAQQFTDLKRHLAHVSQDEW
ANLPEASDFTKRNKRMRLLEQSRQRFYATPDNIISAQRAGDGNRFTRLETEAQDDLENGI
ETDLMMADIQKNRTILSSLRKSEPNRSSSWIASARLEVQAKNFSAAKRFIAEGCKRAPHS
EDVWLESIKIHQNSTDGIKVSKVIVTEALKYNSGSEKLWLKACECENSADLVSQRRVLMK
GIEFIPGSVKLWEKMIELQEDEADVKKMLSKVVELCPSEWNFWLSFINLSPYEEAKNLIN
RARKAMKNNHQVWITAAKLEERESMSISDVKIMKMLEKGIKTSNEHTEEHQKLTRSQWLD
EAARAEKEGFLLTCKAIVFSTISFGISADEPDKLNIYFTEARKYSTDGFHETGNYIYEYI
TTQYPNDIECWIRFFEAYKSVESFKVEGIYKFYERAISFNNEEEVFPLMYAKDKWKLGDD
ITGARDILDEALKRLDTKEDIWHAKIKFEIKTGNLETANKISKTMIQTIPKASARVWYKH
IHLQRYINKVMEITDYQTYILKLVDEALEWFPEEEKLHLQNGQILLEDLNLVEQAKEAFL
VATNKHPEYVDVWISLAKVYEEKLNVIIRARSILDSAITQNPNDDRLWLEKIGLERRNKD
LIAARQLCNKALRSFNSSPRVWIEYLTLIPKMSQRKNAFLDALKSTDNSPIILLNIGIFF
WVDGKLKKAKSWFDRALDSDPQNGDIWGWLYNFHKQNGSPDEVQQFQKQFAKGGESINRG
YVWNKVAKAVESFNKEPIEILELVSSQLKGDTKI
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
atggataggaaagcgttccttgaccaggaagcacccgccggctacgtggcgggggtggga
cggggtgccactgggtttgtcaccagtgccgatgcgggcggactcaggtctgtacgtcca
tttgagccctcagacagtgaggatgacaatggtgacaacaacagtttggggctcttaggc
ggccagagcaaggatgacgaagaggccgaccgtgtgtacgatgaggtcgagcgacggctc
cagaagcgccacaaaaataccctgcaattggaggtggtgcaacaagatgaagagaaccaa
atagcgcagcagttcaccgacttgaaaagacatttagcacacgtatcgcaggacgagtgg
gcaaacttgcccgaggccctggacttcaccaagaggaacaagagaatgcggttgttggag
cagctgagacagcggttctatgctacacccgataatatcatttctgctcagcgggctggc
gatgggaaccggtttactcgtttggagactgaagcacaagacgacttggaaaatggaatt
gagactgatctcatgatggcagacatccagaagaaccgaacgatcttatcatctttgcgg
aagtcggagccaaaccgttccagttcatggatagcttctgctagactcgaagttcaagct
aagaacttttcggctgccaaaagatttattgcagaaggttgcaaacgagctcctcatagc
gaagacgtatggcttgagagcattaagatccaccagaattccactgatggtatcaaggtt
tcaaaggtgattgtgactgaagcattgaagtacaacagcggttctgagaagttgtggttg
aaagcctgcgaatgtgagaactcagctgatttggtgtcacagcgtcgtgtgctcatgaag
ggtatagagttcatccctggtagtgtcaagctctgggaaaagatgatagaattacaggag
gacgaggccgatgtgaaaaaaatgctttcaaaggtagtggagctttgcccaagcgagtgg
aatttctggttatcctttataaatttatcaccctacgaagaagccaagaacctcatcaac
agagcaagaaaggccatgaaaaataaccatcaggtgtggattacggccgcaaagttggag
gaacgtgaaagtatgtcgatttcggatgttaagatcatgaaaatgctagagaaaggtatc
aagaccctgaacgaacataccgaagaacatcagaagttgacgagaagccagtggctcgat
gaggctgcaagggcagagaaagaaggctttttgttgacgtgcaaagccatagttttcagc
accatcagctttggcatatctgcagatgaaccagataagttgaacatttacttcacggaa
gctcgcaagtacagcacggacggatttcatgagacagggaactatatttatgagtatatt
acaacccagtatccaaacgatatagagtgttggataaggttttttgaagcatacaaatcg
gttgagagctttaaggtggaaggaatctacaagttctatgaaagagccattctgttcaat
aacgaagaagaagtattccccttgatgtatgcaaaagacaaatggaagcttggtgatgac
atcacaggtgctcgagacatcttagatgaggctctcaagcgtttggatactaaagaagat
atctggcacgctaaaatcaagtttgaaatcaaaactggcaatttggaaactgccaacaaa
atttccaagacaatgattcaaactatccccaaggcttcagccagagtatggtataagcat
attcatctccaaagatacatcaacaaggtcatggaaattaccgattatcaaacttatata
ttgaagcttgttgatgaggccctcgagtggtttcctgaagaggaaaaacttcatttacaa
aacggccaaattcttcttgaggatttgaatttggtggaacaggcaaaagaagcgtttctt
gtggctaccaacaaacatcccgagtatgtcgatgtctggattctgttggcgaaggtctat
gaggagaagttgaatgttattatcagggcaagatcaatattagactctgcgatcacacag
aaccctaatgatgatagactttggctcgaaaagatcggcttggaaagacgcaacaaagac
ttgatagctgctcgtcagctatgtaacaaagcattaagaagcttcaactcttctccccgt
gtttggattgagtacttgacattaatccccaaaatgtcccaaaggaaaaatgcatttctt
gacgctttaaagtccactgataactctccaataatcttattaaatatcggtattttcttt
tgggtggatggtaagctaaagaaagcgaagtcctggttcgacagagccttggacagcgat
ccacaaaatggtgatatctggggctggttatacaattttcacaaacaaaatggatctcca
gacgaagtgcaacagtttcaaaagcagttcgccaaaggtggtgaatccattaatagaggc
tatgtgtggaacaaagttgcaaaagcagttgaaagcttcaataaggaaccaatagagatc
ttagagcttgtatctctgcaactcaagggtgatacgaaaatataa
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