Yamadazyma tenuis: 18249081
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Entry
18249081 CDS
T03099
Symbol
brr2, PSN45_000551
Name
(RefSeq) Pre-mRNA-splicing helicase BRR2
KO
K12854
pre-mRNA-splicing helicase BRR2 [EC:
5.6.2.6
]
Organism
cten
Yamadazyma tenuis
Pathway
cten03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cten00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
18249081 (brr2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cten03041
]
18249081 (brr2)
Enzymes [BR:
cten01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
18249081 (brr2)
Spliceosome [BR:
cten03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
18249081 (brr2)
Complex C
U5 SnRNP specific factors
18249081 (brr2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
ResIII
Helicase_C
BRR2_plug
AAA_22
Motif
Other DBs
NCBI-GeneID:
18249081
NCBI-ProteinID:
XP_066013571
LinkDB
All DBs
Position
1:1102902..1109177
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AA seq
2091 aa
AA seq
DB search
MSNLNNVVQPDRRRLEDTTDSTPQSIVGHISMKEMGSHAVSENLNSETKSVSKANNISTT
NTRFQASSIASIENLSYYPTTDENSDFLNDLMIQVHHKLTDASHDTIVSATDVILEILKN
DEMSVTDKRQEIDSLLDTKVTDVELNDLINLGKKITDYRQHEQADDNQEGMAIVFEEDED
EEENVAEAEAAVEEEDDEFRSPVPVAESTAGEGINDTAVLKGTTPGSLLLLSQIGDDYID
KKLVDVEKDVVDDFKVKLADLELSGSDLEGELSNIVKDTQILHHLLDNRWKIVFKMKFIR
SGYESIKQQLVDLNLLELIEEFNELMAANNKKRRLSEDNVDKSTKSTKIEKRIPKRIDLE
ALVFDQGAHLMASTKVKLPKGSYQQNKKLYDIVSIPAPEIPDEVIEARKNLVPITDMPEW
AQEAFPSGETATLNVVQSKIYPMAFKTDENLLLCAPTGAGKTNVAMLTILRTIENFRTES
GQIKLNDFKMVYIAPLKALVQEQMREFQRRLTANYGVVVNQLSGDSNLTKQQIVETQLLV
VTPEKWDVITRKSTDLSYTNLVRLIVIDEIHLLHDERGPVLESIVSRTLRQVEETGNNVR
LVGLSATLPNFEDVARFLRVDMEKGLFFFNATYRPCPLEQKFIGIKEKKAIKKLAAMNEA
CYEMLTDSILSNQQLIIFVHSRKETFKTANWLKNKLEEEEKLDSFLGSSLGVKEILKSEA
DMMLNKNLQEILPSGFGIHHAGLNKDERTVVEDLFAQGHIKCLISTATLAWGVNLPAHTV
VIKGTETYSPEKGTWVQLSPQDIIQMLGRAGRPRYDKSGEGVIITSQDEIQYYLAILNQQ
LPIESQLMGKLADNINAEIVLGTISSLEDAVNWLSYTYLYIRMLKSPALYHVGAEYGNDE
NLYYKRLDLAHSALMVLQENNLVNYNPVSGNVKATELGKIASHYYINYRTMNMYNNHLKP
WLTEIELLSIFASSGEFKFIPLRSEEKLEVSKLYEKVPIPIKENSTDPLAKVNVLLQAYI
SRLTLEGFALMADMIYVTQSAGRLLRALHEICLRKNWASVSKTTLDLCKMVEKRMWLTNS
ALRQFGSSVSKEIVRATESSHVPFVNYFTLSPEALAEAVNLKGNSRRVHELLKQFPRLNL
SYYAQPLTHNLLRVQVEVVPNWDWNPSVHGNFQDFLLFVEDCDGDKILYRDKVSFARSSE
NKELLVEFTLPFLDPVQPNYFVSFINDRWLHSEYKIPLMISDLKIPKKSPNFTKLQDQPN
VLTSEVKVPDFIETFDFKYFNKFQSQVFQSLYNTDDNTFIGMSKGSGKTVCAELAILRHW
KNNKGRILYLQPNEQAVYKLTKRWKKLYRSIGGEGKEVEKLTGELATDLAILSSNHLILS
TPEVFDFVSKRWRQRKAVQAIEMVICDDVQLIGSGSSGVSYENVVARMKFISSQLEVNIR
FVALSSTLANGRDFGEYLECPRQSIYNFEPSERFHKIQEIVIQGTNFGDNRTMLLNSIKP
SYTFLKNNTGQGKSLLFVSSRKNCVEAAYNIVQNAENDSWKLLRSDVASIESYLNKVKDH
TLKELLKRGVGIFYPDMNSVDQLVVERLFESEVLTVLVVAKDCASFCPPANHVVVLGTEE
YYGREHRYVNFPINTVLEMIGCCSDEMGQSKVMIFTRNATMNHYSKFLNEGLPLESYYNS
MIHDIFITEVSNRTFKERQDCVDWLTFTYFYRRLQMNPSFYDVKDTSHMGISEFLSDLVE
ETIKDLTDNNLIELEEAEEVENQGSDEELEEILSPLNGALIASHHNVSYHTMVELNKLDN
KTKLRGILEIVCSAAEFEELPMRLGDSTNLQKIYNQVPVKSSNPDFESPYFKTFILLQAH
FSRLQLPLDLRADLVFILKQVMKVIGACVDTVSSEGYLNAIQVVDLSQMVIQGIWNRDSP
LKQIPHINEGILTRCKKYNVETVYDIMALEDDERDDVLQLEEAELEDVAEFVNKYPNVDI
SYELEESVVANEPVMVTVNLERDEEMEDLSVVSSVFESHKREEWWIVIGDAASKQLYGIK
KTSIAKESQTVQLEMTIPSSGKHNLTIWCMCDSYLDADKEVSLEVEVQPGE
NT seq
6276 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaccttaataacgtggtacagcctgatcggcgaaggctcgaggataccacagac
tcaacaccacagtccatagttggtcacatatctatgaaagagatgggttcccatgcggtt
tccgaaaacctcaattctgagaccaagtcggtgagcaaggccaataacatctccaccaca
aacactcgattccaggctagctctatagcttccatcgaaaacctatcatactacccaacc
acagatgagaactctgattttttgaacgatcttatgatccaagtacatcacaaattgact
gacgctagtcatgatacgattgtctctgccacagatgtgattctcgagattttgaagaac
gacgaaatgtctgtaactgataagcgacaggagatagacctgctcttagacaccaaggtg
acagatgttgagctcaacgacttgattaatttgggtaagaaaatcaccgattaccgtcaa
catgagcaggctgatgacaaccaagaaggtatggcaattgtgtttgaggaagacgaggat
gaggaagagaacgtcgcggaggcagaagccgctgtggaagaagaagatgatgagttccgg
tcgcccgtaccagtggctgagtcgactgctggtgaaggtataaatgatacagcagtgcta
aaaggtactactccaggatcactactattgttgagccagataggagacgactatattgat
aagaaacttgttgatgtcgagaaggatgtggtggatgatttcaaggtcaagttagcggac
ttggagttgagtggctcagacttggaaggagaacttctgaatatagtaaaagatacacag
attcttcaccaccttttggacaacaggtggaagattgtgttcaaaatgaagttcatacgg
tcgggttatgaatccatcaagcaacagctcgtggacctcaacttgttggagttgatcgaa
gagttcaatgagctcatggctgcgaacaataagaaaagacggttgtctgaggacaatgtt
gacaaaagcaccaagtccaccaaaatagagaaaagaatcccaaagagaattgatctcgag
gccttggtgtttgaccaaggtgctcatctaatggcatctacgaaggtgaaacttcctaaa
ggctcttaccagcagaacaagaagctctacgacattgtgagtattccagctcctgaaatt
ccagatgaggtaatagaagccagaaagaatcttgttcctataacagacatgcctgaatgg
gcccaggaagcatttccctctggagaaactgccacattgaatgtggtgcaatctaaaata
tatcctatggcatttaaaaccgacgagaacttgttactttgtgctcccacaggggctggt
aagacaaatgtggcaatgttaacaatacttcggactattgaaaacttcagaactgagtcg
ggacaaatcaagttgaacgatttcaaaatggtgtacatcgcccctttgaaagctcttgtt
caagaacaaatgcgagagtttcaaagacgtctcacagcaaattacggtgtggtggtcaac
caattatcaggagactccaacttgaccaagcagcagattgtggagacccaacttttggtg
gtgacccctgaaaaatgggacgttataaccagaaaatctaccgatttgtcctatacaaac
ctcgtacggttgattgtgatcgatgaaatccatttattgcacgatgaaagaggcccagtt
ttggagagtatagtatcaagaaccttaagacaagtggaggagaccggcaacaatgtgaga
ttagtagggttatctgccacattacccaacttcgaggacgttgctagatttttgagagtc
gacatggaaaaaggattattcttctttaatgctacctacagaccatgtcctttagagcag
aaattcattggtatcaaggagaagaaggccatcaagaagttggctgccatgaacgaagct
tgttatgagatgctcacagattctatactcagtaaccaacagttgatcatatttgtccac
tcaagaaaagagacgttcaaaactgccaattggctcaagaacaagcttgaagaggaagaa
aagctagattcctttttgggttcaagcttgggtgtcaaggaaatcttgaaactggaagcg
gatatgatgttaaacaaaaatctacaggaaattcttccctcaggatttggtattcatcat
gctggattaaacaaagatgaaagaaccgtggttgaagatttgtttgcccagggacatatt
aagtgtcttatttccactgctactttggcctggggtgtcaatcttcctgcccatacagtt
gttatcaagggaaccgaaacatactctccagagaagggaacatgggttcaactttctccg
caggatattatacaaatgcttggaagggctggaagacctaggtacgataaaagtggtgaa
ggtgtcattattacatcccaagatgaaattcaatactaccttgctattttgaaccaacaa
ctccccattgagtctcagttaatggggaaattggctgataatattaatgctgaaatagtg
ttgggaaccataagctcattggaagatgccgtgaattggttaagctatacttatctctac
atacgaatgctcaaatctcctgccctataccatgtgggagctgaatatggtaatgatgaa
aacttgtactacaaaagactcgatttggctcattcggcgttgatggtattgcaagagaac
aatttggtgaactataacccggttctgggaaatgttaaagcgaccgaattaggaaaaata
gcttcccattactatatcaactatcgtacaatgaacatgtacaacaatcatcttaagccc
tggttgacggagattgaactcttgagtatctttgcatcttctggagagttcaagtttatc
cccttgcgcctggaagagaagttggaagtttctaaactttacgaaaaggtaccaattcca
atcaaggaaaactcgactgatccgcttgccaaagtcaatgttttgcttcaagcatatata
tcacgcttgacacttgaagggttcgccttgatggcagatatgatctacgttacgcagtct
gccggaagactattgcgagccttacacgagatttgcctcagaaagaactgggcttcagtt
tccaaaactactcttgatttgtgcaagatggtagagaagagaatgtggctaacgaactcc
gccttacggcaatttggctcttctgtctccaaggaaatcgttagagccaccgaaagctct
catgttccctttgtcaactacttcactttatctcctgaagcgttggcagaggctgtcaat
ttaaaagggaatagtcgaagagttcacgagctactcaagcagttccctagattgaacttg
agctactatgctcaaccactcacacacaacttgttgagagttcaagtcgaggtggtaccc
aattgggattggaatccttctgttcatgggaactttcaggatttcttattatttgtggag
gattgtgatggagacaaaatcctctatagagacaaagtctctttcgcaagatcatccgag
aacaaagagttattagtggagttcactttaccttttttggatcctgtacaacctaattac
tttgtcagcttcattaatgataggtggttacactctgagtataaaatcccgttgatgatt
tcagacttgaagatccccaaaaagtctcctaatttcaccaaacttcaagaccaaccaaat
gtcttaacgtctgaggtgaaagtccctgactttattgaaacgtttgacttcaagtatttc
aacaagttccagtctcaggtgttccagtctctctacaacacagatgataacacctttatt
ggaatgtctaaggggtcagggaagactgtctgtgctgagcttgccatattgagacactgg
aagaacaataaaggaagaattctctatttgcagccaaatgagcaagcagtttataaactc
acaaagagatggaaaaagctatacagatcgataggaggcgaagggaaggaggtcgaaaaa
ctcacaggtgagttggctaccgatcttgctatactttcgtcgaatcatttgattttgagt
actccagaagtgtttgatttcgtatcaaagagatggagacaaagaaaggctgttcaggcc
attgaaatggttatttgtgatgatgtacagctaattggttctggctcgtccggtgtgtct
tacgaaaatgttgttgcaaggatgaagttcatttcttctcaacttgaagtaaacattcgt
ttcgtagctttatcaagcactttggccaacggaagggattttggtgaatatcttgaatgt
cccagacagtctatctacaactttgagccttctgaaagattccacaagattcaggaaatc
gtcatccagggcacgaattttggtgataacagaaccatgcttttgaatagcattaagcca
tcatatacctttttgaagaacaatactgggcaaggaaaatcccttttgtttgtgtcttca
agaaaaaactgtgttgaagccgcttacaacattgttcaaaatgctgaaaatgacagttgg
aagctactacggtcagatgtcgctctgatagaatcgtaccttaataaagtcaaggaccat
acattgaaggagcttttaaaaagaggtgttggaatattctatccggatatgaactcggtt
gatcaattggtggtggaaagactttttgaaagcgaagtgcttactgtgttagtggttgca
aaagattgtgcaagcttctgtcccccagcaaatcatgtagtggtcttaggaactgaagag
tactatgggagagaacacaggtatgtgaactttcccattaacaccgtattggaaatgatt
ggatgttgttctgacgaaatgggccagtcgaaagtgatgatattcactagaaatgccact
atgaaccactatagcaagtttttaaacgaaggattacctttggaaagttactacaattcg
atgatacacgatattttcatcactgaagttagtaacagaacattcaaagaaagacaagac
tgtgttgattggttgacattcacctatttctaccgaagattacaaatgaaccccagcttc
tacgatgtcaaagatacttcgcatatgggaatatcagaattcttatcggatttagtggaa
gaaaccatcaaggacctcactgacaacaacttgatcgagttggaagaagccgaggaagtg
gaaaaccagggttcggacgaagagctcgaggagattttatctccattgaatggggcctta
attgcctcccatcacaatgtttcttaccatacgatggtggagttgaacaagttggacaat
aagaccaagttgagaggaattttggagatcgtttgttcggctgctgagttcgaagaatta
cctatgagacttggagactccaccaatcttcagaagatatacaatcaggttccggtcaag
tccagtaatccagatttcgagtctccgtacttcaagacatttatactccttcaagcacac
ttctctcgtcttcaactcccattggacttgagagccgatcttgttttcatcttgaaacaa
gtcatgaaggtcattggtgcttgtgtcgacacggtttcaagtgaagggtatttgaatgcc
atccaagtggttgacttgtcccaaatggtgattcagggaatttggaaccgtgactcgcca
ttgaagcagattcctcatattaacgaaggtattttgacccgatgtaagaagtacaatgtt
gaaacggtttatgatataatggctcttgaagatgatgaacgagatgatgtgctccagctt
gaggaggctgaattggaagatgtggccgaatttgtcaataaatatcccaatgtggatatc
agctatgaactcgaagaatcagttgtagcaaacgagccagtgatggtgacagtgaatctc
gaaagagatgaggaaatggaggacttgtcggtggtgtcgtctgtgtttgaatctcataag
cgagaggaatggtggattgtgattggagatgctgcttccaaacagctttatggtatcaaa
aagacctcaattgccaaagaaagtcagacggtgcaattggagatgacgataccgagtagt
ggtaaacacaatctcacgatttggtgcatgtgtgattcgtacttggatgccgataaggag
gtgagtttggaggtggaggtgcagcctggggagtag
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integrated database retrieval system
