Yamadazyma tenuis: 18249295
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Entry
18249295 CDS
T03099
Symbol
CRM1, PSN45_001465
Name
(RefSeq) Karyopherin transporter
KO
K14290
exportin-1
Organism
cten
Yamadazyma tenuis
Pathway
cten03008
Ribosome biogenesis in eukaryotes
cten03013
Nucleocytoplasmic transport
cten03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
cten00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
18249295 (CRM1)
03008 Ribosome biogenesis in eukaryotes
18249295 (CRM1)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
18249295 (CRM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cten03019
]
18249295 (CRM1)
03009 Ribosome biogenesis [BR:
cten03009
]
18249295 (CRM1)
03016 Transfer RNA biogenesis [BR:
cten03016
]
18249295 (CRM1)
03036 Chromosome and associated proteins [BR:
cten03036
]
18249295 (CRM1)
Messenger RNA biogenesis [BR:
cten03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
18249295 (CRM1)
Ribosome biogenesis [BR:
cten03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
18249295 (CRM1)
Pre-60S particles
18249295 (CRM1)
Transfer RNA biogenesis [BR:
cten03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
18249295 (CRM1)
Chromosome and associated proteins [BR:
cten03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
18249295 (CRM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
IBN_N
CRM1_repeat
DUF6581
BIG2_C
Motif
Other DBs
NCBI-GeneID:
18249295
NCBI-ProteinID:
XP_006689956
UniProt:
G3BFV8
LinkDB
All DBs
Position
2:complement(398512..401757)
Genome browser
AA seq
1081 aa
AA seq
DB search
METILDFSQDLDIGLFDQVVDMFYKGSGPDQQKAQQVLNEFQDNPDSWKKADQILSNSKN
SQSKYIALSCLDKLILYRWKLIPTNEQVGIRNFIVNMIIALCDDEEIFAKDKSLINKIDM
TLVQILKQEWPHNWPQFIPEIVLSSRSSFNVCENNMVILKLLNEEVFDYSHDQMTQAKSK
SLKLSMGAEFEEIFKLCYEILDKTTKPSLVVSTLNCLLKYVHWVPRNYIFETDLLKLLCN
KFLSPINTRSVSLKCLIEISSLSSSGYEKNCLEFFKDSMDQIYQIIPPSTNLKKSYQSAS
SNDQSFLQDFAMFLCTFLSNNLLLLEQLEEFGDLLNNSLYYLIELSKIEERELFKTCLDY
WSQFVRELYEEIQRLPQQELSPLMRLNYTPSSRNGIGSGGAPDPSVLAKFPLRQHRYSAI
LSKLRLVMIENMVRPEEVLIVENDEGDIVREFVKESDTIQLYKSMRECLVFLTHLDVVDT
DQIMIEKLARQIDGSQWSWTAINTLCWAIGSISGTMNEDMEKRFLVTVIKDLLSLTEMKK
GKDNKAVVASNIMYIVGQYPRFLKAHWKFLKVVVNKLFEFMHETHEGVQDMACDTFIKIT
SKCKKHFVAIQPQEREPFILEIIRNIQQITEDLQPQQVHTFYEACGIIVSAQNIKESRDS
LLSELMKLPNIAWNAIVQQSGRDPQLLTDAGTVKIIANILKTNVAVCKALGPGFYSQLGM
IYVDMLSLYKAVSSMISDSVARDGIIATKTPKVRGLRTIKKEVLKMIETYIDKADNLEEI
VRDLSQPLFAAVLEDYQNNVPDARDAEVLKCMSTLVSKVGHMIPEGVVLILQHIFECTLD
MIKNDFVEYPEHRVEFYGLLKEINSHSFQGLLQLSGDAFQSLINAALWAFKHNNREVEEN
GLSLTLELIENVEKLGDTPFTKAFYENFYFQVLSDTFYVITQPDHKSGFTYQSQLLAQLV
HLVEDNIIKAPLYTPDQAAPGTSNSDYLKQYLGTLLSSAFENLQKEQIINFLGVLTTVYK
DQNKFKATLRDFLVQIKQFGGDATDYMFAEDKELEKQEQTRLQRQKDMQVGGLIKPSEMD
D
NT seq
3246 nt
NT seq
+upstream
nt +downstream
nt
atggaaacaatcttggacttctctcaggatttggacataggcttgtttgatcaggtggtg
gatatgttctacaaaggctcaggacctgaccagcaaaaagcgcaacaggttttgaatgag
ttccaggacaatccagacagctggaagaaagccgaccaaattttatccaactccaaaaat
agtcaatccaagtacatagcattgagctgcttggacaagttgattttatacaggtggaaa
ttaattccaaccaacgaacaggtgggaatccggaactttatagtcaacatgatcatagcc
ttgtgtgacgatgaagagattttcgccaaagacaagtctttgatcaacaagattgacatg
actttggtgcagatattgaagcaggaatggcctcataactggccccaatttatccctgaa
atcgttttgagctccaggagtagtttcaatgtttgtgaaaacaatatggtcattttgaaa
ttgttgaatgaagaagtgttcgattatagtcatgatcagatgacccaggccaagagcaag
agcttgaaattgagcatgggggccgaattcgaagagattttcaagttgtgctatgaaata
ttggataaaaccaccaagccttctttggtggtgtcaactttaaactgcttgctcaagtac
gttcattgggttcctcgtaattacatttttgagacagacttattgaagttgttgtgtaac
aagtttttgagccctattaataccagatctgtgagcttgaaatgcttgattgaaatcagt
tctttgagctcttccggttatgagaaaaactgtttggaattcttcaaggattccatggat
cagatttaccaaattatacctcctagtaccaacttgaagaagtcataccaaagtgccagt
tcgaatgatcagtcatttttacaagattttgccatgtttttgtgcacctttttatccaac
aacttgttattattggagcagcttgaagagtttggcgacttgttgaacaactccttatac
tacttgatagaattatcaaagattgaagagagagagttgttcaaaacttgtttggactac
tggtctcaatttgttagagagttgtatgaagagattcaaaggttgcctcaacaagaattg
agtcctttgatgagattgaactacactccttcctctagaaacggaattggtagcggaggt
gctccagatccctctgttttagccaagttcccattaagacagcataggtattctgcaatc
ttatccaaattacggttagtgatgattgagaacatggtaagacccgaagaagtgttgatt
gttgaaaatgacgagggtgacattgttagagagtttgtcaaagaaagtgacaccattcaa
ttgtacaagagtatgagggaatgtttggttttcttaactcatttagatgtcgtcgatact
gatcaaataatgattgaaaagttggccagacaaatcgatggaagtcagtggtcttggact
gctataaatacattatgttgggctattggatcaatttctggtacgatgaatgaagatatg
gagaagagattcttggttactgtgattaaggatttgttatcgttgactgaaatgaaaaaa
ggaaaagataataaggccgtggtagcgtccaacatcatgtacattgttggtcaataccct
aggttcttgaaggctcattggaagtttttaaaagttgttgtaaacaagttattcgagttt
atgcacgaaactcatgaaggtgtccaagatatggcctgtgatactttcatcaaaattacc
tccaaatgtaaaaagcactttgttgcaattcagcctcaagaaagagaaccttttattctt
gaaataattcgtaatatccagcaaatcacagaggatttgcaaccccaacaagtccacact
ttctacgaagcttgcggtatcattgttagtgctcaaaatatcaaggaatcgagagattct
ctcttgagtgaattgatgaagttacccaacatcgcttggaatgcaattgttcaacaatct
ggtagggatccccaattattgaccgacgctggaactgtcaaaattattgctaatatcctc
aagaccaatgtggctgtttgtaaggctttgggaccaggattttacagtcagttgggaatg
atttatgtggatatgttgtcgttatataaggcagtcagttcaatgatctcagattccgtc
gctagagatggaatcattgctaccaagacgcccaaggtcaggggtttaagaacgatcaaa
aaagaggtgttgaaaatgattgaaacttatattgacaaagctgacaatttggaagaaatc
gtaagagatttgtcccaaccattatttgcagcagtgttggaagattaccaaaataacgtt
cctgacgctagagatgctgaagtattaaaatgcatgtccacgttggtgtctaaagtcgga
catatgatacctgaaggtgttgtactaattttgcaacacatcttcgaatgcactttagac
atgatcaagaatgactttgttgaataccctgaacacagagtggagttctacggtttgtta
aaggaaatcaactcgcactcgttccaaggtttattacaattatcgggagatgcattccaa
agtttgatcaatgctgctctatgggcatttaaacataacaacagagaagttgaagagaac
ggattatctttgaccttggagttgatagaaaatgtcgagaaattaggagatactcctttc
accaaagcattctatgagaacttctatttccaagtattatctgatacgttttatgtgatt
acgcaacccgatcacaaatctggattcacgtaccaatcacaattacttgcccaattggtt
cacttggttgaagataacatcatcaaggctccattatatactcccgatcaagcagctcct
ggtacttccaacagtgactatttaaaacaatatttgggcactcttttgtcgtcagctttt
gagaacttacaaaaagaacagattatcaattttttgggtgtcttgacgacggtctacaag
gaccaaaacaagttcaaggccaccttaagagatttcttggtgcaaatcaaacaatttggt
ggagatgctactgactatatgtttgctgaagataaagagttagagaaacaagaacaaaca
aggttacaaagacaaaaggatatgcaagtgggaggtttaattaaaccatcagaaatggat
gactag
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