Yamadazyma tenuis: 18249446
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Entry
18249446 CDS
T03099
Symbol
UTP4, PSN45_003882
Name
(RefSeq) U3 small nucleolar RNA-associated protein
KO
K14548
U3 small nucleolar RNA-associated protein 4
Organism
cten
Yamadazyma tenuis
Pathway
cten03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cten00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
18249446 (UTP4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cten03009
]
18249446 (UTP4)
Ribosome biogenesis [BR:
cten03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
18249446 (UTP4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_MABP1-WDR62_2nd
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
ANAPC4_WD40
Beta-prop_DCAF4
Beta-prop_EML
Beta-prop_HPS5
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_NUP159_NUP214
WD40_MABP1-WDR62_1st
Beta-prop_CAF1B_HIR1
Beta-prop_WDR35_2nd
WDR90_beta-prop_4th
Beta-prop_WDR11_1st
NBCH_WD40
WND
Beta-prop_BBS7
Mala_s_1-like
Motif
Other DBs
NCBI-GeneID:
18249446
NCBI-ProteinID:
XP_066014272
LinkDB
All DBs
Position
5:complement(449604..451862)
Genome browser
AA seq
752 aa
AA seq
DB search
MNIHRCRFVDYTPHTITTVAFSHPSAPYSVAVGDLRLAVGRSNGDIEIWNPKFNWTHEIT
LYGSRGRSIEGLCWAVNEEDGYTSPRLFSIGGSTYVTEWDLQTGLPKINYDCNVGVLWSM
AVNKAGNRLAVGSDDGSVCIVDISGGPGSLEHEMICQRQDSRVLSIKWFDNELIVGGCAD
ARIRCWSAVKETKGRLIGTMRVDKSKTESTLVWSVNVLSKRKQIVSGDSTGSVKVWDLNT
FTLLQSFNNHDADVLCIANDFNEEKIFTAGVDRKIHQFNLINPNASNKSKNFKWVHSYNR
LLHSNDVRSVAVFESKGYNFLVSGGVEKSIVIQSINQFHDGKYRKLALTQQHKNTLFNQQ
EKLVVMWQDQTVKIWRVVGTEDASDDEVQYKLVSKLSLADDANITSVSLNSDGNVLVVGT
MESVKVFELAPNSDGKRLKVIKFRDETFDSVVSGCKKSLIYGGNNLLILTSNEELYKFDI
NVDEKKITLENEIEFTDSYDVKSDITYVSNIKNLVINKAEDTLAISRFSGVIEVVSLETF
NLHKLVTLSTLPHLIEFSEQNTLVVLTEENKILEFYVKQNAKMDSLLTPWSKRNSEFLPR
KFLTLEEKPERLFFDKTGKLWIYGKNWLCYFNLSINIPINKTYKNTVASKKRTRDGLTID
EDQEDEGDDEESSISIMELSLRQAQINKFREQDKDADDNDNDTENEKPFWISFKYRPILL
VDSFNGENFIMVERNPHLTGSSPAFNLPKIKV
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atgaatatccaccgttgcaggtttgtggactacacgccgcatacaatcacgaccgttgca
ttctcccatccatcggctccatacagtgttgcggtaggagacttgagattggctgtggga
agaagcaatggagatattgagatctggaacccaaagttcaactggacgcatgaaatcaca
ttgtatggatcaagaggaagatccatagaaggattatgctgggctgtcaacgaagaagat
ggctacacctcacctcgtttattttccataggtggctcaacctacgttaccgaatgggac
cttcaaacgggattaccaaaaatcaactatgattgtaatgttggagtcctttggtctatg
gctgtgaacaaagcaggaaatcggttggcagtgggaagtgacgatggaagcgtttgcata
gtagacatttccggaggtccaggttcgttggagcatgaaatgatttgtcaaagacaagac
ctgagagtgttgagcatcaaatggtttgacaatgaattgatagtaggtggatgtgctgat
gccagaatcaggtgttggtcggcagtaaaggagaccaaaggaagattgatagggactatg
agagtcgataagtccaaaactgaaagtactttggtgtggtctgtgaatgttttgagcaag
cgaaagcagattgtgagtggggattctactggttcggttaaagtgtgggacttaaacacc
tttactttattgcagagtttcaacaaccatgatgccgatgtcttgtgcattgctaatgac
tttaatgaggagaaaatattcactgctggtgttgatagaaagattcaccagttcaattta
atcaaccccaacgcatctaacaagtctaaaaatttcaagtgggtacacagctacaacaga
ctattgcattccaatgatgtcagatcagtagcggtgtttgaaagtaagggttataatttc
ttggtgagtggaggagtagaaaaatccattgtgatccagtccatcaaccaattccatgat
gggaagtacagaaaattggcattaactcaacagcataaaaatacattattcaaccaacaa
gagaagctagtggttatgtggcaggatcagacggttaagatatggagagttgttggcact
gaagatgctagtgatgatgaggtccaatataagttggtttccaagttaagtctcgccgac
gacgccaatattaccagtgtttctttgaatagcgatggaaatgttcttgtagtgggaacc
atggaaagcgtcaaggtatttgaacttgctcctaatagcgatggtaaaaggttgaaagtc
attaagtttagagatgagacctttgattctgttgtcagtggctgcaaaaaaagtctcatt
tacggaggaaacaacttattgattttgacttccaacgaagaactatacaagtttgacatt
aatgtagacgagaagaaaatcacgttggaaaatgagattgagttcaccgattcatatgac
gtcaagtctgatataacctacgtttccaatatcaagaacttagtgattaacaaggctgaa
gatactttagcgatcagcagattcagcggagtgatcgaggtagtatccttggaaaccttt
aacttgcacaagttggtgacattgtcaacattacctcacttgatcgagttctccgaacaa
aatactttggtggttttgacggaagaaaacaaaatcctcgagttttacgtcaagcaaaat
gcaaaaatggactcgttgttaaccccatggtccaagagaaatagtgaattccttcctaga
aagtttttgacattggaggaaaaaccagagagattattcttcgataaaaccgggaaattg
tggatttacggtaagaactggctttgctacttcaacttatccatcaacatcccaataaat
aaaacctacaagaacaccgttgcttccaagaaaagaactagagatgggttgactattgac
gaggaccaagaggatgaaggtgatgatgaagaatccagtataagtataatggaattgtct
ttgaggcaagcccaaatcaacaaattcagagagcaagacaaagatgccgacgacaatgac
aatgacaccgaaaatgaaaagccgttctggatctccttcaagtacagacctatattatta
gtggatagtttcaatggtgaaaattttatcatggttgaaagaaatccccacttaactggg
tcttctccagcattcaatttaccaaaaatcaaggtttga
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