Yamadazyma tenuis: 18249552
Help
Entry
18249552 CDS
T03099
Symbol
RAD16, PSN45_001039
Name
(RefSeq) DNA repair protein RAD16
KO
K10848
DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
cten
Yamadazyma tenuis
Pathway
cten03420
Nucleotide excision repair
cten03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cten00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
18249552 (RAD16)
03460 Fanconi anemia pathway
18249552 (RAD16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cten03032
]
18249552 (RAD16)
03400 DNA repair and recombination proteins [BR:
cten03400
]
18249552 (RAD16)
DNA replication proteins [BR:
cten03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
18249552 (RAD16)
DNA repair and recombination proteins [BR:
cten03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
18249552 (RAD16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC4
Motif
Other DBs
NCBI-GeneID:
18249552
NCBI-ProteinID:
XP_006688483
UniProt:
G3B7S9
LinkDB
All DBs
Position
1:2141998..2144895
Genome browser
AA seq
965 aa
AA seq
DB search
MSLFVGEDDDTETELLAQTEAHVEVPVQELERSLPTTALEPDVSELPEPIKLSLPLKYQR
EIVSDLLAKDALLILGKGLGWEIIVANILYILNLSNLKDKLPNPPANRKSLLILLNANEV
ENHKIAADLLELQASMTVVGGESTVVDKRRQIYQKGGVVSITSRILVVDLLSEVLKPEEI
NGLFVLHAERIKETSNESFIVNLYRDQNEWGFIKAFSDDPESFTGFTPLASRLRHLKLSN
TLLWPRFHVDVIESLSFRHKKFHRDLKTVNEINIKLSYKMTRIQSALLTCIEQCLKELIR
HCQSLSTDYWDIENLYDPDFVHRIRNSLESHWHRLTQTPKSLVYDLGFLKGLLSSLLTRD
SLTFYQIVQSAVDGNLRRSVNTSGTMNLTSMSPWLNSDVAPTITSYAKERALGMSKYVGS
DGVESVEYNLEPLPKWIELNKLLKEIGPNSRILVMASDRMVVEELQCLIQKFIMTGEINS
RSYMVSKLRGYLMWKELSKLRRQLSNDVNDDEQDDIVVSKTFKRSRENASIRRRTRGASS
VANVNRLYSVDDSDRNPESADIDTAVLEKLELENQENEPKEFSKAHVKQEPNENELEDDD
LIIIDEQRYTIEVQSFNSKTDDTLLNEFKPTHIIFYEPNLSFIRRVENYQGVHFNEPAKV
YMMFYGTSAEEQSSLVQMKKEKEAFTRLIREKANLSKHFETKEDTKFTITKKHVVNTRIA
GGQRFQTEDDEFRVIVDVREFNSSLPNLLYRVGSKVIPCMLTIGDYILTPKICVERKAIP
DLIASFQSGRLYNQCEQMSRYYELPVLLIEFDEEKSFSFEPFSESRTRPGAPVSNNTNRF
LQDHIQNKITMLLISFPKLKIIWSSSPYQTAQIFIELKAGEEAPDITSAINKGLNSDESP
ALYNEGAIDLLQSIPGINASNFHLIMNRVRNIEEMVKLTKQDFCDILGEENGAKAYNFIN
RSVRP
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttgtttgtaggagaagatgatgatactgaaaccgagctcctcgcccaaacagaa
gctcatgtggaagtgccggttcaggagctcgaaaggctgctaccgaccacggccttagag
ccagatgtttcagaacttcctgaacctattaagttgagcctaccgctcaaatatcagcga
gaaatagtcagtgatttgctcgccaaagacgcgttgcttattcttgggaaaggcttgggg
tgggagattatagttgccaatatcctttatatcttaaacttgtcgaatttaaaggacaag
cttcccaatccacctgcaaaccgcaagagcttacttatcttgctcaacgctaatgaggtt
gaaaaccacaaaattgctgctgatttgcttgaattgcaagcttctatgactgtggtagga
ggagagtccacggtggtagacaagagacgacaaatctaccagaagggtggagttgtgtca
ataacactgagaatcttggtagtagacttgctttcagaggtcttgaagccggaggaaatc
aacgggttgtttgtcctccatgccgagcgaatcaaggagacgtcgaatgagtcgttcatt
gtgaacttgtatcgtgaccaaaatgagtgggggtttatcaaagcattttctgatgatcct
gagctgttcactggattcacgccattagcaagtcgattgcggcacctcaagctatccaat
actcttctttggccccgatttcatgtggacgtcattgagtccttgagctttagacataaa
aagtttcacagagacttgaagacggtgaatgagattaacatcaagctttcgtataagatg
accagaatccagtcggcacttttaacttgtatcgagcagtgtttgaaggagttgatacga
cactgccagctgctatccaccgactactgggatatagaaaatctatatgatccagacttt
gtacatcggattcggaacctgcttgaatctcattggcaccgattgacccaaactcccaaa
ctgttggtctatgaccttgggttcttgaagggattacttctgtcattattgacgagggac
tcgttgacgttctaccagattgtccagagtgcggtagatggtaacttgaggcggtcagta
aacacttcaggaaccatgaacctaacatcgatgagtccgtggttgaactcggatgtggca
ccgaccatcacgtcatatgccaaagaaagggctctcggaatgtccaaatacgtaggtagt
gatggagttgaatccgtggagtataaccttgaacctctccccaaatggatcgagttaaac
aaacttctcaaagaaattggtccaaactcccggattttggtcatggcatcagacagaatg
gttgttgaagagcttcaatgtcttattcagaaatttataatgacaggtgagataaattcc
agaagctacatggtttctaagcttagagggtatttgatgtggaaagaattgagtaaactt
cgaagacaacttagtaacgatgtgaatgatgatgagcaagacgatatagttgtatcgaag
acattcaaaagaagcagagaaaatgccagcatccgaagaagaacgagaggtgcctcatca
gttgcgaatgttaataggctctattcggtcgacgatagcgaccgtaaccctgaatcagct
gatatagataccgctgttcttgagaaacttgagctcgaaaatcaggagaatgagccaaag
gaatttctgaaagctcacgtcaagcaggagcctaatgaaaacgagttagaagatgatgat
ttaataatcattgatgaacaaaggtacactatagaggttcagtcgttcaactcaaagacc
gatgatacacttcttaacgaattcaaacccacgcatatcatcttttatgagcccaacctt
tcatttattcgaagagttgaaaattaccaaggagtgcatttcaatgaacctgcaaaggtg
tacatgatgttctatggaacgtcagcagaggagcaactgtcgttggtgcaaatgaaaaag
gagaaggaggcgtttacacggttaattcgagaaaaagccaacttgagcaagcatttcgaa
actaaggaagataccaagttcaccattaccaaaaagcacgttgtaaacaccaggattgca
ggaggacagagattccaaactgaggatgacgagttcagagtcatagtggatgttcgagaa
ttcaattcatcacttccaaacctactctatcgtgttggtagtaaagtcatcccgtgtatg
ttgaccattggagattacattttaactcccaagatctgtgttgaaagaaaagctatccct
gatttgattgcgagttttcaaagtggacgtctatataaccagtgtgaacagatgtctaga
tactacgaacttcccgtcctattgattgaattcgatgaggaaaagtcgttttcttttgaa
cctttcagcgaatcccgtacaaggccaggagctcccgtcagtaacaacacaaaccggttc
ctccaggaccatattcagaacaagattaccatgttactcatctcattccccaagctcaag
atcatctggtcgtcttccccataccaaactgcacaaatattcatcgaattgaaagcaggt
gaagaggctcctgacatcacgctggccataaacaaaggattgaactcggatgagctgcct
gccttatacaacgaaggagctattgacttgctccaaagtattcctggaatcaatgcttca
aacttccacttgataatgaaccgagtacgcaatatcgaggaaatggtcaaactcacaaaa
caagatttttgcgatatcttgggagaagaaaacggagctaaagcctataacttcatcaac
agactggttcgtccgtaa
DBGET
integrated database retrieval system
