Yamadazyma tenuis: 18249582
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Entry
18249582 CDS
T03099
Symbol
rfc1, PSN45_002145
Name
(RefSeq) DNA replication factor C complex subunit Rfc1
KO
K10754
replication factor C subunit 1
Organism
cten
Yamadazyma tenuis
Pathway
cten03030
DNA replication
cten03410
Base excision repair
cten03420
Nucleotide excision repair
cten03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cten00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
18249582 (rfc1)
03410 Base excision repair
18249582 (rfc1)
03420 Nucleotide excision repair
18249582 (rfc1)
03430 Mismatch repair
18249582 (rfc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cten03032
]
18249582 (rfc1)
03400 DNA repair and recombination proteins [BR:
cten03400
]
18249582 (rfc1)
DNA replication proteins [BR:
cten03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
18249582 (rfc1)
DNA repair and recombination proteins [BR:
cten03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
18249582 (rfc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
Rad17
RuvB_N
RNA_helicase
AAA_16
nSTAND3
AAA_22
AAA_17
Gp44_lid
NACHT
AAA_33
AAA_14
AAA_assoc_2
NTPase_1
AAA_28
AAA_18
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
18249582
NCBI-ProteinID:
XP_066013899
LinkDB
All DBs
Position
2:join(1728539..1728589,1728649..1731123)
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AA seq
841 aa
AA seq
DB search
MVLVTDFFKAKKPAAKRKSSPPHESLNKKQKPDAPAPEIIDLDDELQIKHDDGDDTVEEI
KSPPYKSSPQKAVVKKSPKKPTTKEQPSPPSGASAEEILASIPDAELPDTSDSQKLSFFQ
LQQRKAQAPQATGSVDIPEAKPHCLSGLTMVFTGVLPNLERTDAENIAKRYGAKVPKSIS
GKTSVVVIGDEAGPSKVQKIKKMHIKAISEEGFLQLLRSMPADGGSGGEAVKAKRKREEE
ESRIIQEAEAEEEQERARQQQAKIQHVPPSVSKHSSRLPAEPVREISNDDKLWTTKYAPT
STLQLCGNKGQVNKLRSWLLHWFDNAKNDFKDPGADGSGVFRACLISGPPGIGKTTAAHL
IAEDLGFDVLEKNASDVRSKSLLNSDIKSVLNNTSVMGFFQNRHADVHQENERRFCLIMD
EVDGMSSGDHGGAGALSQFCRITKMPMILICNDKSLPKMRTFDRVTYDLAFRRPSENEVK
ARIMTICHREKIKIDPSIIGQLVQTTNNDIRQMINLLSTVSKTQKTIGAEQSKDFSKSWQ
KQTVLKPFDIVGKLLNGQIYSPHSNHTLNDKIDLYFNDIDFTPLMVQENYLYTRPSNCRD
DSDHLRRVAQAADDISASDRINSLIRSSEQQWSLLPFHAVMSSVKPSREVAGNISQRINF
AGWLGQNSKQMKYQRLLQELQYHTRLRTSTDKKELRLEYVPLLAKRLAGPIVSQGENGIQ
PCIDVMDYYFLTREDWDTILDFGVGAAKGEAVLKKIPTKVKTAFTRTYNSSTHPIAIYKT
GNSVGTTKSTASTVDYEDVIQDDTLKDDDDTEEKDDSKFDSKKDKLIKEVKPKKGAKRSK
K
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atggtcttggtaacagatttcttcaaggccaaaaaaccggccgccaaacgaaaatcctct
cccccacatgagctgttgaacaaaaaacaaaagccggatgctccagcgcctgaaatcata
gatcttgatgatgagctacaaatcaaacacgatgacggtgacgacaccgtcgaggagatc
aaatccccgccctataaatcatcgccccaaaaagcagttgtgaaaaagtctcccaagaaa
ccaactacaaaggaacaaccttcaccaccatctggcgccagcgccgaagagatcttggcc
tcaattcctgacgccgaattgcccgacacgtcggattcccaaaaactctctttttttcag
ttgcaacaacgtaaggctcaagctcctcaagccaccgggtctgtcgatatccccgaagca
aaaccccattgcttatcaggactcacgatggtattcacgggcgtgttgcccaacctcgag
cgtacagacgctgagaacatcgccaagcgatacggcgctaaggtgcccaaatctattctg
ggtaaaaccagtgtggtggtgattggagacgaggctgggccgtcgaaagtgcagaaaatc
aaaaagatgcacattaaggccatttcggaggaagggtttctccagctcttacggagcatg
ccagcagatggcggttctggtggcgaggcagtgaaggccaagaggaagagagaggaagag
gaaagtagaattatacaagaagctgaagccgaagaagaacaagaacgagctcgccagcaa
caggccaagatccaacacgttccaccgtccgtcagcaagcatctgtcacgtctcccggcg
gagcctgttcgggagatctccaatgacgacaaattatggaccaccaagtacgcacccacg
tcaactcttcagctctgcggcaacaaaggccaggtcaacaagttgcgtctgtggttgctc
cactggttcgataacgcaaagaacgacttcaaggacccgggggccgatgggctgggggtt
ttccgtgcttgtttgatcagtggtcctcccggtataggcaaaaccacggctgcgcacctc
atcgccgaggacttggggtttgacgtgttggagaagaacgcatcggacgtgcggtccaag
tctttgttgaacctggacatcaagagcgtattgaacaacacgtcggtgatgggattcttc
cagaaccgacatgctgacgttcaccaggaaaacgagagacgcttctgcctcattatggat
gaagtcgacgggatgtcatccggtgaccacggcggggccggggcgttgtcacagttctgc
cgtatcaccaagatgcccatgatcttgatctgtaacgataagtcgttacccaagatgagg
acgtttgaccgggtaacgtacgaccttgcgttcagacgcccgagcgaaaacgaggtcaag
gctcggatcatgaccatatgccacagggagaagatcaagatcgacccgctgattattggc
cagttggtgcaaaccaccaacaacgacattcggcagatgatcaatttgctctcgaccgta
tccaaaacccagaaaaccatcggggccgagcagagcaaggacttttccaagtcctggcag
aaacagacggtgttgaagccgtttgacatagttggtaagttactcaacgggcagatctac
tcaccgcactccaaccacacgttgaacgacaaaatcgacttgtacttcaacgacatcgac
ttcacgccgttgatggtccaggagaactacttgtacacacggcccagtaactgccgtgat
gatagtgaccacttgcggcgggtagcccaggcagcagacgacattagtgccagcgatcgc
ataaactcattgattcggtccagtgaacagcagtggagtttattaccgttccacgcggtg
atgtcgtcggtcaagccgtcgcgggaagtcgcaggtaacatcagtcagagaatcaacttt
gccgggtggttggggcaaaactccaagcagatgaagtaccaacggctcctccaagaattg
caataccacacccggctcagaacttccaccgacaaaaaggagttgcggttggagtacgta
ccgctcttggctaaacggcttgccgggcccattgtctcccagggtgaaaatggtatccaa
ccgtgcatagacgtgatggactactactttttgacccgagaagattgggacaccattctc
gatttcggcgtgggtgcggccaagggcgaagccgtgctcaagaaaatccccaccaaggtc
aagaccgccttcacccgtacgtataattcatctactcatccaatagccatctacaagact
gggaattcggtggggaccaccaagagtacggccagcaccgtggattacgaggacgtgatt
caagatgacacgcttaaggatgatgatgataccgaagaaaaggacgactcgaagttcgac
tccaagaaagataagcttatcaaggaagtcaagcctaagaagggcgcaaaaagactgaaa
aaatag
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