Yamadazyma tenuis: 18249595
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Entry
18249595 CDS
T03099
Symbol
SPB4, PSN45_001871
Name
(RefSeq) ATP-dependent rRNA helicase spb4
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
cten
Yamadazyma tenuis
Brite
KEGG Orthology (KO) [BR:
cten00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cten03009
]
18249595 (SPB4)
Enzymes [BR:
cten01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
18249595 (SPB4)
Ribosome biogenesis [BR:
cten03009
]
Eukaryotic type
Pre-60S particles
Helicases
18249595 (SPB4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTT_SPB4
CTE_SPB4
ResIII
Motif
Other DBs
NCBI-GeneID:
18249595
NCBI-ProteinID:
XP_006689581
UniProt:
G3BDS3
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Position
2:complement(1196089..1197915)
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AA seq
608 aa
AA seq
DB search
MEKKKGSLSWDKLQGQLHPWLYDAVISLGFQSMTPVQASTIPLLSGSKDVVVESVTGSGK
TLAFTVPVLQKISKLLYDEQIILKKGHFFAVVLSPTRELASQIQAVFDSLIAYLPEDKPA
IKTQLLIGSIGTVREDLQKFVKTSPQILIATPGRFLDFISSTNVRTNSTEIVILDEADKL
LDISFGKDVVSVLQRLPKQRRTGLFSATLSAAGDSIFKAGMTNPVKVTVKGSTSSLNSSA
PKSLNLSYMLINPEKKITTMLKLLHDYKFKKCIVYFPTCTSVKYFYLTFKSLLPPDFTAK
FHSLHGQLTSKSRLKTLGNFVDADTSEFKHVLMTTDVAARGIDIPDVDLVIQIEPPMDPD
VFLHRCGRTGRANKVGRAITFLNNENSHEVEFVDYMEVKGITLNELPAIYDNNHAQFASK
MRGFLLKDRGVHELAIKSYVGFIKYYSKHVASSIFRLSLLDYIGIAKAYGLLRLPKMPET
RYIPIEQMPEDGWLGEKIDMNKYAYADSQKEKVRLATMEADNLKRIEDSKRRKELKVKNE
AWSKKVDSKETKQDRREKSKKKREAIEKQLMEESSSDNEEAEIDWKEVVRENKRHKSNVQ
VQGSFDDL
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atggagaagaagaaaggatctttatcttgggacaaactccaaggtcagcttcacccatgg
ctctatgatgcagtaatttcactaggtttccaatctatgactccagttcaagcctcaact
atcccattgttatcgggatcaaaggatgtcgtggttgagtctgtcacaggctcaggaaag
actttagcgttcaccgtgccagtccttcagaaaatctcaaagttgctttatgacgagcag
atcatattgaagaagggtcattttttcgctgtggtattgtcccccactagagagttggca
agtcaaatacaagctgtttttgactccctcatcgcatatttgcctgaagataagcctgcc
atcaagactcagttacttattggttcaatcggaactgtgagagaagatttgcagaaattt
gtcaagacgagtcctcagatcttaattgccactccagggaggtttttggactttatctcg
tctactaatgtgagaaccaactctactgaaattgttatcttggacgaggctgataagcta
ttggacatttcctttggcaaagatgttgtcagtgtgttgcaaaggctcccgaaacagaga
agaaccgggcttttctctgccaccttgtcggctgctggtgatagtattttcaaagcaggg
atgacaaatcctgtgaaagtcacagtcaaagggtctacctcatcattgaacagttccgct
cccaagtccttgaatttgagctatatgcttattaaccctgagaaaaagataacaactatg
ttaaagcttcttcatgattataaattcaaaaagtgcatcgtttactttccaacttgcaca
tcggttaaatacttttatttgacgttcaaatccctacttcccccagatttcaccgcaaaa
ttccactccttacatggtcagttgactagtaagtcaaggttgaagacacttgggaacttt
gttgatgccgacacgtctgagttcaaacacgttcttatgaccaccgatgtcgcggcaaga
ggaatcgatattcctgatgtggatcttgtcatccaaatagagcctcccatggatcctgat
gtattcttacacagatgtggacgaactggtcgagccaataaggttgggcgtgcaatcacc
tttcttaataatgaaaatagtcatgaggttgagtttgtggactacatggaggttaaaggt
attactctcaatgagttaccagcaatttatgataacaatcatgctcagtttgcttctaaa
atgagaggctttctcttaaaggacagaggagtccacgagttggccatcaaatcatatgtt
ggctttatcaaatattacagtaagcatgtcgcatcttctatctttcgattatcgcttctt
gattatattggaatagccaaggcatacggacttcttcgtctccccaagatgcctgaaacc
aggtatatcccaattgaacaaatgcccgaagatggatggcttggggagaagattgatatg
aacaagtatgcctatgctgatagccaaaaggaaaaagttcgacttgcaaccatggaggcc
gataacctcaaacgtattgaagactctaaaagaaggaaagaattgaaagtcaaaaatgaa
gcgtggtcaaagaaagtggatctgaaggagacaaagcaagatagacgagagaagagtaaa
aagaagagagaagcaatagaaaaacaacttatggaggaatcttccagcgacaacgaagaa
gctgaaatcgattggaaggaggttgtgagagaaaacaagaggcacaagagtaacgttcaa
gtacaagggtcttttgatgacttgtag
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