Yamadazyma tenuis: 18249965
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Entry
18249965 CDS
T03099
Symbol
UFD2, PSN45_001171
Name
(RefSeq) Ubiquitin conjugation factor E4
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
cten
Yamadazyma tenuis
Pathway
cten04120
Ubiquitin mediated proteolysis
cten04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cten00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
18249965 (UFD2)
04120 Ubiquitin mediated proteolysis
18249965 (UFD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cten04121
]
18249965 (UFD2)
Enzymes [BR:
cten01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
18249965 (UFD2)
Ubiquitin system [BR:
cten04121
]
Ubiquitin ligases (E3)
U-box type E3
18249965 (UFD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
DYH2-5-8_CC
DUF4142
Motif
Other DBs
NCBI-GeneID:
18249965
NCBI-ProteinID:
XP_006688589
UniProt:
G3B8S7
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All DBs
Position
1:complement(join(2390426..2393578,2393683..2393697))
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AA seq
1055 aa
AA seq
DB search
MSADDIRAKRLAKLGSRIPNPTASTSASNNNPTVVPESNELPVSSEPEKKKVSLDTTQRQ
KLPSVQPPTPVPKPVATVPPEQDIANWFTFHLKDIFKVSLVPSKDLVYVESVAHELQESG
RLVSGDDLESIFMEVLSELGVPRPFKTTIDYLFHIYNESLRLRNRLSKKEPNLEKKTALV
HSITQFSCNYGYICFQVGDMFINNDLQSLTNTFINSSSTMSGFLTDIVYESIEQDGLLDM
LNLLFPAISSQLGRINLHDPSYNKYLVIFKTLVGIKQVAAVFSQVVGFKPPNSEEGLDFE
CKTLLGPLLRLSPLADKVGVSYFGEGFDDNNFTRINSAYDSINVEFKLIVDQLFEIVNKL
IRGSPETRNSVMKWFADLVNVSHLRTGSHSDPAKLAGDGIMFNIFVILTRLSGPFLEYPL
YSKTDKIDLNYLVNKQCLVDLKEETRVNSTLAESGEYVESFSSQEKPNFISDCFYLTLTY
LNYGVGGISVKYDKLKNQIKQLKERIAMIENRQVPQGTNPMMMQFLGQQLPTLNKQLSLL
NIKKHTVKALFNSRDLQLEIFDFIVGATVFITKVIDPSHQHPQTKLKIPIFKIDRVSQLD
DQDFLRTKCPSPWKYFPEFFLEGMINYCKFTTHFRGCPLVRNDQKLQLFIEFAIILIRCP
EILGNPHMKSNIIEILFIGSLPMQDGSPGFLADIFISNVLVRDNILYSLLDLYVMVEKTG
ASSQFYDKFNSRYYISVILEELWKNDVYKNQLTKYSTSNIEFFVRFIARMLNDTTYLLDE
TFNELNSIHNFQQEIKRRQGGQPGDEQEFGSTDDLLKNLQSSEKKAESYMGLSNKTMELF
KLFTKHVPRGFMLPELVDRLAGMLDYNLEAMLGPKASNLKVEDPTKYHFNPREILQSLCE
VYYNLAHEPEFVKAVARDARSFNVNWFYKAERILSTKTMTDSKTISRLVEFAKNAEKQRL
EDENDELELGEIPDEFLDPLMFTLMEDPVILPSSRVSIDRSTIKAHLLSDSTDPFNRVPL
KLEDVLDDFELKDKIEAFKRSKHNPQTSTPMEIDG
NT seq
3168 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcggatgatattcgagccaagagacttgcaaagttgggatctagaatacctaat
cccaccgcaagcacctctgcttccaacaacaaccctactgttgttcccgagctgaacgag
ctaccagtactgtccgaacctgaaaagaagaaagtatcgttggataccactcaacgacag
aagttgccatccgttcaaccacctaccccagttcccaaaccagtggccaccgtgccacca
gaacaggatatcgccaattggttcactttccatttgaaagatatcttcaaggtgagcctt
gtgccttcgaaagacttggtttatgtcgagtcggtagctcatgaattgcaagagtcagga
cggctcgtttctggtgatgatttggagtcgattttcatggaggttttatccgaattaggt
gtccccagacctttcaagacgacaattgactatttgttccatatctacaacgagtcgttg
aggttgagaaaccggttactgaagaaagaaccaaacttggagaagaaaaccgctcttgtg
cattcaatcacccagttttcgtgtaactatggttatatttgtttccaggttggtgacatg
tttatcaacaatgatttgcagtcgttaaccaacactttcatcaattcctcgagcacgatg
tctgggttcttaactgatattgtctatgaaagtatcgaacaagatggcttgttagatatg
ttgaacctattgtttccggccatcagcagtcagttgggccggatcaacttgcacgacccc
tcatacaacaagtatttggtcatattcaagaccttggttggtatcaaacaagttgctgcg
gtattttcacaggtggtgggattcaaaccgcctaacctggaagaaggtttggattttgaa
tgtaaaaccttgttgggtcccttactaaggttgtctcctcttgctgacaaggtaggtgta
agttatttcggtgaaggttttgatgataacaacttcacccggatcaactcggcgtacgat
tcgataaacgttgaattcaaattgattgtggaccaattgtttgaaattgtcaacaagttg
atcagaggatctcccgagactagaaacctggtgatgaaatggtttgccgacttggtgaat
gtcagccatttgagaactggtagtcattcagaccctgccaaattggcaggtgatggtatc
atgttcaacatctttgttatcttgaccagattaagtggaccattcttggaataccctctt
tattccaaaacagataagattgacttaaactatttggttaacaaacaatgtttggttgat
ttgaaggaagaaactcgagtcaactccactcttgctgaaagtggtgaatatgttgaaagt
ttcctgtcccaggaaaagcctaacttcatatctgactgtttctatcttactttaacctac
ttaaattacggggttggtgggatttccgtcaaatatgataagttgaagaaccagatcaag
cagttgaaagagaggattgcaatgattgaaaaccggcaggttccacaaggtacaaaccca
atgatgatgcagtttcttggtcagcagttaccaactttgaacaagcagttgtctcttctc
aacatcaaaaagcacactgtgaaagcccttttcaattcaagggaccttcagcttgaaatc
tttgatttcattgtgggagccactgttttcattaccaaagtcattgacccatctcaccag
catcctcaaacaaagctcaaaattccaatcttcaagattgatagagtaagccagttggat
gatcaagacttcttacgaaccaagtgtccatctccctggaagtatttccctgagttcttt
ttggaaggtatgattaactactgtaagttcaccactcatttcagaggttgtccattggtg
agaaatgatcaaaagctccaattgttcattgaatttgcaatcatcttgattcggtgtcct
gaaattctaggcaaccctcacatgaagtccaatatcatagaaattttgttcattggttca
ttgcctatgcaagatggtagtcctgggttcttggctgatattttcatctccaacgtcttg
gttagggacaacatcttgtactcgttattggatttatatgtcatggttgagaaaaccggt
gcatcatctcagttttatgataagttcaatagcagatactatatatctgtgattttggaa
gaattatggaagaatgacgtctacaaaaatcagttaaccaaatactccactagcaatatc
gagttctttgtgagatttatcgctagaatgttaaacgatacaacctatttacttgacgaa
acgttcaatgagttgaactcaattcacaattttcaacaagaaatcaagagacggcaggga
ggtcaacctggtgatgagcaggaatttggaagtacggatgatcttttaaagaacttgcaa
agtagcgagaaaaaggctgaaagttacatgggattaagtaataaaactatggaattgttt
aaactattcaccaaacatgtccctagaggatttatgctacccgaattggtagatcggttg
gcaggtatgttagactataatcttgaggcaatgcttggtcctaaagcttctaacttgaag
gttgaagatcctaccaagtaccatttcaatcccagagaaattttacaatctttgtgtgaa
gtttactataacttggcccatgaacctgaattcgttaaagcggttgcaagagacgctaga
tcatttaatgtcaactggttctacaaagccgaacgaattctatccaccaagaccatgact
gattccaaaaccattagtcgattagtcgagtttgcaaagaatgccgaaaagcagaggctt
gaagatgaaaatgacgagttggaattaggagaaatccccgatgagttcttagatccatta
atgtttacgttaatggaggatccggtgatcttaccaagctccagagtaagtatcgatagg
tcaacgattaaggcgcacttgttaagtgattctacagacccatttaatagagttccattg
aagttagaggatgttcttgatgattttgagttaaaggacaagattgaagcatttaagcgt
ctgaaacacaatcctcaaacttcaactccgatggaaatagatggttag
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