Yamadazyma tenuis: 18250057
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Entry
18250057 CDS
T03099
Symbol
RDH54, PSN45_001338
Name
(RefSeq) helicase
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
cten
Yamadazyma tenuis
Pathway
cten03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cten00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
18250057 (RDH54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cten03400
]
18250057 (RDH54)
DNA repair and recombination proteins [BR:
cten03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
18250057 (RDH54)
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
Motif
Other DBs
NCBI-GeneID:
18250057
NCBI-ProteinID:
XP_066013737
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Position
2:complement(join(161104..163543,163889..163935))
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AA seq
828 aa
AA seq
DB search
MNIPNILNVNTQVNSCSQKTDEKSGKRFMVQWRKVTNKKNKTWDGDGIIDVKGSSITAKI
DGRTITKIIPRTDGIFKVGGYELEVDCEIGGSDKQERPLQLEQAKTTPHLAQIPSFKKLM
PSLTKVKKPLFQKTEDSFVMKKGKETDTDVIIDPILSKVLRPHQKEGVSFMYNGVMGYSF
GANGVLLADDMGLGKTLMSITLIWTLIKQSPNPEKKNEANKVLIMCPVTLINNWRREFKK
WLNINQIGILVVDNNSTNYKQDLRNFSKSSAYQVMIMSYERLLNCEEEMLDIKFDLLVCD
EGHKLKNNTNKSLKILTNMDVSKKVLLSGTPIQNNLTEFYTLINFINPGAFGTFTSFQKK
FIKPIEMSREVNCYNKEVIKMGKTASKELSSITKTFVLRRTNDILFKYLSSKTDVLLFVK
PSHQQLELFDLIMSNCSFADYDNNNVLNLINVFKKICNSPSLLQDDNLFNSLSGGYKTEL
STSSGKIDLLIMMLIEIINEKKEKLVIVSNYTKTLDLLEKVLKKLNFEFLRLDGSTNPST
RTSIINQFNNVSFPRYPIFLLSSKSGGFGINLIGASRLILFDNDWNPSNDLQAMSRIYRD
GQLKPVFIYRFFTTGCLDEKIFQRQLMKNNLSDKFLNDSKANSNVFDMNDLKDLFTVHEY
TNCNTHDLLECDCGGQGDTQQLEPEVSDILTSEADNEDAQQSAVRSSSLSDGGWVSALNY
SQMDQAGSRKKQSFKNALSDYKHHDPKINAFNCPDDIVQTIIKKTKSNTAISYVFTKVSN
PVGKGPLLEDSSKENSVESATPEVDHFSPDPLNKSSPIFYESDYEPSQ
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atgaatatacctaatattttaaacgtgaacacgcaggtgaatagctgttcacagaaaaca
gatgaaaagtcgggtaaacggttcatggtgcaatggagaaaagtcacaaacaagaagaat
aaaacatgggatggagacggcatcatagatgtcaagggttcttcaattactgcaaaaatt
gacggtagaaccatcaccaagataattcctagaaccgatggtattttcaaagtgggaggc
tacgaattggaagtggactgtgaaataggagggtctgataagcaagaacgccctctccag
cttgaacaggccaaaacaaccccccatcttgctcaaataccatcgttcaagaagcttatg
cccagcttaaccaaggttaaaaaaccacttttccagaaaactgaagattcatttgtgatg
aagaagggcaaagagactgatactgatgtcattatagacccaatactactgaaagtttta
cgtccgcaccagaaggaaggagtcagtttcatgtataatggggtaatgggctacagtttc
ggagccaatggagttttattggcagatgatatggggttgggcaaaactttgatgtctata
acgcttatctggacattaataaaacaaagtccaaacccagaaaagaaaaatgaagctaat
aaggtgttgataatgtgtcctgttacgttgattaacaattggaggcgagaattcaaaaag
tggttaaacatcaaccagattggcattttggtggtcgataacaactccactaattacaaa
caagacctacggaactttagcaagtcatctgcgtaccaggtgatgatcatgagttatgag
agactattgaattgtgaagaagaaatgcttgatattaaatttgatttattggtgtgtgat
gaaggacacaaattaaagaataacacgaacaagtcattgaagatattgacaaacatggat
gtctcaaagaaggtattgttatctggaacccctatacaaaacaacttgactgagttctac
actttaatcaactttataaatccaggtgcatttggcacttttaccagctttcaaaagaag
ttcattaagccaatcgagatgagcagagaggtcaactgctacaataaggaagtcatcaag
atgggtaaaactgccagtaaagagttgagttctattacaaagacttttgttctaagaaga
acaaacgatattctcttcaaatacttgagctctaagacagatgtattgctatttgtcaag
ccaagccaccaacaattagaactatttgatctaattatgtcaaactgctccttcgctgac
tacgataataacaacgtcttgaaccttatcaatgttttcaagaagatttgcaactcgccg
tctcttctccaggatgataatctattcaattctcttagtggcgggtacaaaacggagtta
ctgacttcaagcggaaaaattgatttattaataatgatgcttatagagattatcaacgaa
aagaaagagaaattggttatcgtgtcaaactataccaaaactcttgatcttttagagaag
gtgttgaagaagctaaactttgaattcttgcgattggatggttcaactaatccttcaact
cgtacgtcgattataaaccagttcaacaatgtatcttttcctagataccccatattttta
ctatcttctaaatctggagggtttggaatcaatcttattggtgcctcgagattgatctta
tttgataacgattggaatccttctaatgacttacaagccatgtcaaggatatacagagat
ggccaattgaaaccagtgtttatctacaggttctttaccaccggttgtttggatgaaaag
atctttcaaagacagctcatgaagaataatctcagtgacaagtttttgaatgattccaag
gccaatctgaatgtttttgatatgaatgacttgaaagatcttttcactgttcatgagtac
accaattgcaatactcacgatcttttggaatgtgattgtggaggacagggagatacacaa
cagctagaaccagaagtctccgatattcttacctcagaagctgataatgaagatgcccaa
caatcagcagtgagatcatcttcacttctggatggtgggtgggtttcagcattgaactat
agtcaaatggatcaggctgggtctagaaagaagcaatccttcaaaaatgcattatctgat
tacaagcatcacgatcctaagatcaatgctttcaattgtcctgacgatattgttcaaaca
attataaagaagacgaagagcaatacagctattagttatgtatttactaaggtttctaat
ccggtcggcaaaggcccgttacttgaagatagctccaaagagaattcggttgaatctgct
acaccagaagtcgaccacttttcaccagaccctttgaataagtcttcgccaatcttctat
gagtcggattacgaacctctgcaataa
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