Yamadazyma tenuis: 18250477
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Entry
18250477 CDS
T03099
Symbol
PSN45_000921
Name
(RefSeq) uncharacterized protein
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
cten
Yamadazyma tenuis
Pathway
cten03018
RNA degradation
cten03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cten00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
18250477 (PSN45_000921)
09123 Folding, sorting and degradation
03018 RNA degradation
18250477 (PSN45_000921)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cten03019
]
18250477 (PSN45_000921)
03041 Spliceosome [BR:
cten03041
]
18250477 (PSN45_000921)
Messenger RNA biogenesis [BR:
cten03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
18250477 (PSN45_000921)
mRNA degradation factors
5'-3' decay
Lsm complex
18250477 (PSN45_000921)
Spliceosome [BR:
cten03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
18250477 (PSN45_000921)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
GRP
Motif
Other DBs
NCBI-GeneID:
18250477
NCBI-ProteinID:
XP_006688370
UniProt:
G3BBP2
LinkDB
All DBs
Position
1:join(1913338..1913340,1913427..1913645,1913702..1913902)
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AA seq
140 aa
AA seq
DB search
MLPLYLLNSAKSQPILVELKNGETLNGLLTNCDSWMNLTLSEVIQTSPNAEVFTKIPEIY
IRGSHIKYLRLPEQTMDYAKEQNMINMEQRNKNQNRRGGRPNNNSGNFNRRRNDNNRGGN
YNNRRGNSSNYHQSHGAGDS
NT seq
423 nt
NT seq
+upstream
nt +downstream
nt
atgttaccattatatttgttgaattccgccaaaagccagccgatattggttgaattgaag
aatggggagaccttgaatgggttattaaccaactgtgattcctggatgaatttaaccctt
tccgaagtgattcaaacatctcccaacgctgaggtattcacaaagataccggagatctat
atcagaggtagtcatatcaaatacttaagattgcctgaacaaactatggactatgccaag
gagcaaaatatgatcaacatggaacaaagaaacaagaaccaaaacagaagaggcggaaga
cccaacaacaactccggaaatttcaacagaagacgtaacgataataacagaggaggtaac
tataataaccgtcgtggaaacagcagcaattaccaccagtcccatggtgctggagacagt
tag
DBGET
integrated database retrieval system
