Yamadazyma tenuis: 18250517
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Entry
18250517 CDS
T03099
Symbol
PUB1, PSN45_002154
Name
(RefSeq) E3 ubiquitin-protein ligase pub1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
cten
Yamadazyma tenuis
Brite
KEGG Orthology (KO) [BR:
cten00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cten03019
]
18250517 (PUB1)
03041 Spliceosome [BR:
cten03041
]
18250517 (PUB1)
Messenger RNA biogenesis [BR:
cten03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
18250517 (PUB1)
Spliceosome [BR:
cten03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
18250517 (PUB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_5
RRM_7
Motif
Other DBs
NCBI-GeneID:
18250517
NCBI-ProteinID:
XP_006689317
UniProt:
G3BBX3
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Position
2:complement(1747528..1748955)
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AA seq
475 aa
AA seq
DB search
MSTPSIPPSSDTRNPTDSTHPTSTGGDAAGATSVPVASAVHGGRQVSNRILYVAGLDKSI
DEAELSKVFGQYGSIKLIKILGDKNKLGFNYAFIEFQEPNSASDALSGLNGKNINDHIIV
IKWAYHSSNANSVQSAEPVFNVFVGDLSPEVDDVTLSKAFSQFKSKREAHVMWDMQTSRS
RGYGFVTFLDQLDAQMAINSMNGQEVLGRVIRCNWASHKQKPQQPFKKTTPLRTSQPLAH
SPILQLPAPEQFSPGQFGSVPFSPVSGQLAQFPNTLGPIHPHAHHPHQVMQMQMPMKAHR
ISSQVSGPPLHMVGGGTRGPTSSLMSSGMELEPLDEFVRNGSGASAGSGANTTLSGPNDV
DMGLEMPLVSPQSYEIVLRQTPAWQTTVYLGNIAHFTRQEELIPLIQGFGYIVDLKFHPE
KGCAFVKYDSHERAAMTIVQLAGFNLNGRPLKCGWGKDRPPGPYRNVSQNFIQRP
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaccccatcaatccctccttcttctgacactcgaaaccctacagacctgactcat
cctacctccaccggcggcgacgccgccggtgccacgctggtgcccgtggccagcgctgtc
cacggtggccgacaagtgtccaaccgtattctctacgtggcgggtcttgataagtccatc
gatgaagccgagttatccaaggtatttggccagtacgggagcatcaagctaatcaagatc
ctcggcgacaagaacaaactcgggttcaactacgctttcatcgagttccaggagcccaat
agtgcctcggatgcattgtctggcttgaacggcaagaatatcaacgatcatattattgtt
atcaagtgggcgtatcatctgtccaatgcaaactcggtgcagtcggccgagcccgtattc
aacgtgttcgtgggcgacctcagccccgaggtggacgatgtgacgttaagcaaggcattt
tcgcagttcaagtccaaaagagaagcccatgtcatgtgggatatgcaaacatcccggtct
cgtggctatgggtttgtgacgttcttggaccagcttgacgcccagatggccataaactcc
atgaatggccaggaagtgcttggtcgagtcattcggtgtaactgggcttctcataagcag
aagcctcaacagccgtttaagaaaaccactccacttagaacatcgcaaccgttggcgcac
tcgcccattctccagttgccagcccccgagcagttcagcccgggccagtttggtctggtg
ccgttctcgccagtgtcaggccaattggcccagttccccaatactttgggtcccatccac
ccgcacgcgcaccatcctcatcaggtgatgcagatgcaaatgcccatgaaggcccaccga
atttcatcgcaggtactgggacctccgctccatatggtcggtggtggaaccagagggccc
acactgtcattgatgctgtcgggaatggagttggaaccgctcgatgagtttgtgcgcaat
ggatctggtgccagtgccggcagtggagctaacaccacgctactgggacccaacgatgtg
gatatgggcttggaaatgccgttggtatcccctcagtcgtatgaaatcgtcttgaggcag
acccccgcttggcaaaccaccgtctacttgggtaatatcgcccattttacccgacaggag
gaattgatcccgcttatacaagggtttggatatattgtggacctaaagttccacccggag
aaaggctgtgcatttgtaaaatatgatagccatgagcgagcagccatgaccatcgtacaa
cttgctggattcaatctcaatggaaggcctttgaaatgtggctggggaaaagatcgccct
cctggtccctacagaaacgtatcccaaaatttcatccagagaccataa
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