Yamadazyma tenuis: 18250779
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Entry
18250779 CDS
T03099
Symbol
RFC3, PSN45_004322
Name
(RefSeq) Subunit of heteropentameric Replication factor C (RF-C)
KO
K10756
replication factor C subunit 3/5
Organism
cten
Yamadazyma tenuis
Pathway
cten03030
DNA replication
cten03410
Base excision repair
cten03420
Nucleotide excision repair
cten03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cten00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
18250779 (RFC3)
03410 Base excision repair
18250779 (RFC3)
03420 Nucleotide excision repair
18250779 (RFC3)
03430 Mismatch repair
18250779 (RFC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cten03032
]
18250779 (RFC3)
03036 Chromosome and associated proteins [BR:
cten03036
]
18250779 (RFC3)
03400 DNA repair and recombination proteins [BR:
cten03400
]
18250779 (RFC3)
DNA replication proteins [BR:
cten03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
18250779 (RFC3)
DNA Replication Termination Factors
ELG1-RFC complex
18250779 (RFC3)
Chromosome and associated proteins [BR:
cten03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
18250779 (RFC3)
DNA repair and recombination proteins [BR:
cten03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
18250779 (RFC3)
Check point factors
HRAD17(Rad24)-RFC complex
18250779 (RFC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Rep_fac_C
DNA_pol3_delta2
RCF1-5-like_lid
Rad17
AAA_assoc_2
RuvB_N
AAA_14
AAA_11
ResIII
AAA_24
AAA_22
DUF815
AAA_16
AAA_30
DEAD
DNAX_ATPase_lid
AAA_7
AAA_5
AAA_28
bpMoxR
TIP49
AAA_19
Viral_helicase1
Mg_chelatase
AAA_3
MinE
SLFN-g3_helicase
RNA_helicase
nSTAND3
AAA_25
Motif
Other DBs
NCBI-GeneID:
18250779
NCBI-ProteinID:
XP_006687191
UniProt:
G3B669
LinkDB
All DBs
Position
6:complement(join(221428..222394,222449..222477))
Genome browser
AA seq
331 aa
AA seq
DB search
MEKNKENLPWVEKYRPETLDEVYGQSEIVDTVRKFVQEGKLPHLLFYGPPGTGKTSTIIA
LAREIYGPKYKNMVLELNASDDRGIDVVRNQIKDFASTMQIFSKGFKLIILDEADAMTSV
AQNALRRIIEKYTKNTRFCILANYSHKLNPALVSRCTRFRFQPIHTDAIRERLKNVVIKE
KITIKPDAIESLLTLSQGDMRRALNVLQSCKASLDNPDDEIDEEMIYNCIGAPQPKDVET
VLDSILKDDWTTAYLTMDKFKRVKGLALIDLLEGFVGILNKYELDKQTKIKILKGLSEVE
YGISKGGNDKINSSAIIGVIKDAFESQVVEV
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atggagaagaataaagagaacttaccatgggtggagaagtatagacctgagaccttggat
gaagtgtatggtcaatctgaaattgttgataccgttcgcaagtttgtgcaagagggtaaa
cttcctcatttactattctatgggcctccggggaccgggaaaacgtccaccatcattgca
ttagcacgagagatctatggacccaagtacaagaacatggtgttggagttgaacgcttcg
gatgatagaggtatcgatgtggtgagaaaccagatcaaagactttgcttccaccatgcaa
atctttagtaaaggctttaagttgattatcttggacgaagcagacgccatgacatcggtt
gctcaaaacgccttgagaagaatcatcgaaaagtataccaagaacactcggttctgtatt
ttggccaactactcccacaagttgaacccagcgttggtgtccaggtgtactcgcttccgg
tttcaacctatccacaccgatgccatacgggaaagattgaagaacgtggttatcaaggag
aagatcaccatcaagccagatgccattgagtcacttttgacgttgtcccaaggagatatg
agaagagccttgaatgtgctacaaagttgtaaggcatctttggataatcctgacgacgaa
attgacgaggaaatgatatataactgcataggtgctccccagccaaaggatgtggaaacc
gtgttggactcgatcttgaaagacgattggactactgcttatttaacaatggacaagttc
aagagagtcaaggggttggcgttgatagacttgcttgaggggttcgttggaatattgaac
aagtatgaattggacaagcagacgaaaatcaagatcttgaagggcttgagtgaagttgag
tacggtatttcgaaggggggaaacgataagattaactcgagtgccattatcggtgtgata
aaagacgcatttgagagccaggtggttgaggtataa
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