Yamadazyma tenuis: 18250787
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Entry
18250787 CDS
T03099
Symbol
PSN45_000031
Name
(RefSeq) uncharacterized protein
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
cten
Yamadazyma tenuis
Pathway
cten03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cten00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
18250787 (PSN45_000031)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cten03019
]
18250787 (PSN45_000031)
Messenger RNA biogenesis [BR:
cten03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
18250787 (PSN45_000031)
U7-dependent histone pre-mRNA processing factors
18250787 (PSN45_000031)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
HABP4_PAI-RBP1
Motif
Other DBs
NCBI-GeneID:
18250787
NCBI-ProteinID:
XP_006687534
UniProt:
G3B9Z8
LinkDB
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Position
1:complement(69521..72352)
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AA seq
943 aa
AA seq
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MFTFTLLTPADGHSSKASLMTIDGDVNILADISWNGKDHHDLDYLQDTLKSVNLVLLSHS
TPEFIGGYALLCLKFPELMKNIKVYATSAVSQLGRVSTVELYRSVGLIGPLKDAVLEVSD
VDEYFDRVISLKYYQSTNALERLAITPYNSGHTLGGSFWLLQRKLEKIIYAPSWNHSKDS
FLSAASFLSSSTGNPLSQLVRPTALVTGTDVGSNLSHKKRSEKFLQLVDGTLANGGTVLL
PTTISGRFLELLHLVDEHLQSAPIPVLFLSYSGTNVLRYATNLLEWMSPSLSKELENANS
IVTNTGNRNHFPFDPSKVDLVSTPYELTQMAGPKVVFTSGVDLNSGELSSEALRVLCNDE
KTTIILTEKTHFGYDNNVNHKLYQEWIRLCKSKNEGNIEDGIAVPLETQIDLSDWSLEED
LVGNELTDFREKINLKRKQKLIEQVRDRKNKVLTGENFEDSSSSDDDDDDDDDDDDLPVA
PLETAESQATTPGTEDIKKVDVKIETVSPTTTNGTVPAIAVDDAAAHEALVTESIKSSFE
QNLPLDIKITNKLRPRHAMFPFFANKDKQDFDDYGAIINPKDFEKKDDTNTKFSLENKRA
GARSWGTNNDSLDGNQNQNKLTPQEMLNNEIIKRNLDALFHPRKRVAIASSGSTYSANNS
QKISIRCGLSFVDLSGLVDLRSLSLIISSLKPSNLLLLPDTSVDAETKDDPEANGTLKIE
QVLKLQQAQSQQNDAKSSILKSVRFMSLEAIRAGNLGNIKTSKMEILPLESNSKITIGSD
DNGLDVGDFEVKLDDAVSDQLQWHTIDGSYRVAQVQGQLEVRYKKANHKRQKTINNILNQ
SSEFTLKPVDPSSTEKLPSGANKNKLAIGNIRLPELKRKLMSKNMNAEFKGEGTLVVNDT
ISISKITYGSNDGDDTGDIEIKGQFGPLYYQVKECIRELLAYV
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgttcacattcacgttattgacaccggcggatggccattcatccaaggcttcgttgatg
actattgatggggatgtcaacatcttggcagatatctcttggaatggaaaagatcaccat
gatttggactatttgcaagataccttaaaactggtcaatttggtgttattgtcccattca
accccagaattcattgggggttatgcattattatgtttgaagtttccagagctcatgaaa
aacatcaaggtgtatgccacatcagcggtaagtcaattaggaagagtgtcgactgtggaa
ttatatcgatcggtaggactcataggtcctttgaaggatgcagttttagaagtgagtgat
gtggacgaatattttgatcgagtgatcagcttaaagtattatcagtctacaaatgcattg
gagagattagctatcactccctataactcgggacatactttgggaggtagcttttggctt
cttcaaagaaagttggaaaaaatcatctatgctccaagctggaaccactccaaagactca
tttttgagtgccgctagtttcttatcgtcatccacaggaaatccactctctcaattagtg
agaccaaccgctttagttacggggaccgacgtgggctctaacttatcccacaaaaaaaga
tccgagaagtttttacaattagtagacggtactcttgccaacggaggaaccgtgttgttg
cccacaactatcagtggaaggttcttggaactattgcacttggtggatgagcatctccag
agtgctccaatcccagtgttgttcttgtcttatagtggtacaaatgtgttgagatacgct
acaaacttgttggaatggatgtcaccaagcctttccaaagagttggaaaatgcaaattcc
atagtcaccaatactggaaacagaaaccacttcccatttgatccttccaaggtggatttg
gtttctactccttatgagttaacccagatggccggacctaaagtagtgttcacgtcgggt
gtggatttgaacagtggtgagttatcgtctgaagctttgagagttttatgtaacgatgaa
aagactacaattattttaacagaaaagacacatttcggttatgataataatgtcaatcac
aagttgtaccaggaatggatcaggctttgtaaatcaaaaaacgaaggcaatattgaagat
ggaatcgctgtacctttggaaacccagatagatttgagcgactggtccctagaggaagac
ttggtcggtaatgagttgaccgatttcagagagaagatcaacttgaagcggaaacagaag
ttaatcgagcaagtgagagatcgtaaaaataaggtcttgactggtgaaaactttgaagat
agctcatcatctgatgatgatgatgatgatgatgatgatgatgacgatttgcctgtggct
ccattagagaccgcggaaagccaagctacaaccccaggaactgaagacatcaaaaaagtc
gatgtaaagatagaaaccgtttctccaactacaaccaatggtactgttccagctatagct
gtagatgatgcagccgctcatgaagctttagtaactgaaagtattaagagttccttcgaa
cagaacttaccattggatataaaaatcaccaataaattgagacctagacatgctatgttt
cccttttttgccaataaagataaacaagactttgatgattatggagcaattattaacccc
aaagactttgagaaaaaagatgatactaatactaaattcagcttggagaataaaagagct
ggtgctaggagctggggtactaataatgactcactagatggtaaccaaaaccaaaacaaa
ttgacccctcaagagatgttgaataatgagatcataaagagaaatttggacgcattgttt
catcctcgtaaaagagtggcgatagcttcttctggctcaacttattctgccaacaactca
cagaagatcctgatcagatgtgggttgtcatttgttgacttgtctggattggtagatttg
agatctttgagcttgatcatttcttccttgaagccatcaaatttacttttgttgcctgac
acaagtgtcgatgctgaaacaaaagatgaccctgaagcaaatggtactttaaagattgaa
caggttttgaaactacaacaggctcaaagccaacaaaatgatgctaagagctcgatattg
aaatcggttaggttcatgtcgttagaggcaatcagagctggaaatttgggaaatatcaag
actagtaagatggagatcttacctttagagtctaatagtaaaatcactattggaagtgac
gataatggattggatgtgggagattttgaggttaagttggacgatgcggtttctgatcaa
ttacagtggcacaccatcgatggcagttacagggttgcacaggttcaaggtcagttggaa
gttcgttataagaaagcgaatcacaagagacaaaaaactatcaacaatattttgaatcaa
tctagtgaattcacattaaaaccagttgatccttcatcaacagaaaagttaccttcaggt
gccaataaaaacaagcttgctataggtaatattcggcttcctgaactcaagcgaaagctt
atgagtaagaatatgaatgctgaattcaaaggagaaggaactttggtcgtcaacgatact
atttcaatcagtaaaattacttatggatctaatgacggagatgatacaggagacattgag
atcaaaggtcagtttggaccattgtattatcaagtcaaagaatgtattcgtgaactttta
gcttatgtataa
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