Yamadazyma tenuis: 18250893
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Entry
18250893 CDS
T03099
Symbol
NOT4, PSN45_001623
Name
(RefSeq) transcriptional repressor general negative regulator of transcription subunit 4
KO
K10643
CCR4-NOT transcription complex subunit 4 [EC:
2.3.2.27
]
Organism
cten
Yamadazyma tenuis
Pathway
cten03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cten00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
18250893 (NOT4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cten03000
]
18250893 (NOT4)
03019 Messenger RNA biogenesis [BR:
cten03019
]
18250893 (NOT4)
04121 Ubiquitin system [BR:
cten04121
]
18250893 (NOT4)
Enzymes [BR:
cten01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
18250893 (NOT4)
Transcription factors [BR:
cten03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
18250893 (NOT4)
Messenger RNA biogenesis [BR:
cten03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
18250893 (NOT4)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
18250893 (NOT4)
Ubiquitin system [BR:
cten04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
18250893 (NOT4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_4
RRM_1
Baculo_IE-1
zf-RING_2
Lipin_mid
SET_assoc
Motif
Other DBs
NCBI-GeneID:
18250893
NCBI-ProteinID:
XP_006689823
UniProt:
G3BEW1
LinkDB
All DBs
Position
2:complement(699625..701325)
Genome browser
AA seq
566 aa
AA seq
DB search
MSSIDDSFISDEEEEFCPLCVEEMDISDKNFKPCPCGYQICQFCYNNIKQIPELNGRCPG
CRRLYEDSTVEYKSVSAEEFKMQQMKRDRRERDKKQKEKEKKESELASKKHLAGIRVVQK
NLVYVTGLNPPCNPEDLHSVLRSDRYFGRYGKISKIVINKKAPPNAPGAVHHHQNPGLVV
YVTFAKKEDALRCINDMDGSLLDGKILRAAHGTTKYCSSYLRGHPCQNPNCMFLHEPGEE
ADSYTRKDLSTQQGIKMGTMNRVSSSSNLESQDTSTGVAPSQSNEEEEPKEEAKEPAVLP
ATAHWAKANSNTSSPAVDNNAALANPSAFPTLGEIFKEQKQTTTPTKPSKKKKKDAADDS
DSDEAYAPLQVLDEITTNLKNLTHKGEKLVVKFNEEFENFTESTGTFLPLFHFNKDLPKD
LSKVDNGQEKSSSKRIIETYLLRPIKNYHLAYQNHPIIQQQILLQQQQQQQKLNVDPGAS
AQQQQQQLLLLQQLQNQQAPHSQQVPQQQITSQKIPQSAPPQGSQGQSQNGPIPQPIGVG
SAGAPPGLVNNSSSSQLLNQLMTGKR
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcaatcgacgattcattcatcagcgatgaagaagaagagttctgtcccttatgt
gtggaggagatggacatcagcgacaagaacttcaaaccatgtccatgcggataccagatt
tgccagttttgttacaacaatatcaagcagattcctgagttaaatggaagatgccctggt
tgtaggagactttacgaagattcgactgtcgagtacaaatccgtttcagctgaagagttc
aaaatgcaacagatgaagcgtgatagaagagaacgtgataagaagcaaaaagaaaaggaa
aagaaggagagtgagttggccagcaagaaacacttggcaggaatcagagtggttcaaaag
aatttggtctatgtcactggtttaaatcctccctgtaatccagaagacttgcattcggtg
ttgaggtccgacagatactttggtagatacgggaagatcctgaagattgtcatcaacaaa
aaggcacctccaaacgctccaggagcggtgcaccaccatcaaaaccccggtctcgttgtg
tatgtaacattcgcgaagaaggaagatgccttgaggtgtatcaatgatatggatggatct
ttgttggatggaaagatcttgagagctgctcatggtactaccaagtattgttccagttac
ttgagaggtcacccatgccaaaaccccaactgcatgtttttacatgagcctggtgaagaa
gccgattcttatactagaaaagacttgtctacacaacagggtataaaaatgggcactatg
aatagagtttcaagctcatcaaatcttgaatctcaagacaccagtacgggagtagcacct
tcccagctgaacgaagaagaagagcctaaggaagaggcaaaggagccagccgtgttacct
gcaaccgctcactgggccaaagctaactccaacacctcatctccagctgttgataacaat
gctgcgttggcaaacccttcggcattccctactttgggagagatatttaaagagcaaaag
caaaccacaactccaaccaagccttcaaagaaaaagaagaaggatgcagctgatgatagt
gatagtgatgaagcctatgctcctttgcaggtgttggacgagattaccaccaatttgaag
aatttgactcacaagggagagaagcttgtagttaagttcaacgaagagttcgaaaatttc
actgagagcaccggcacgttcttgccattgttccattttaacaaggatcttccaaaagat
ttgagcaaggtggataatggtcaagaaaagtcatcttccaagagaatcatagaaacctat
ttgttgagacccattaagaactaccatttggcttaccaaaaccaccctataattcaacaa
caaatcttgttacaacaacagcaacaacagcaaaagttgaacgtggacccaggtgctagt
gcccaacagcaacaacagcaattgctattgttgcaacaacttcaaaaccaacaggctcct
cattctcaacaggttccccaacaacagatcacttctcaaaagattccccaactggcacct
ccacaaggactgcagggtcaatcacaaaacggtccaattcctcaacccattggagttggt
ctggctggtgctcctcctgggttagttaacaattcttccagctcccagttgttaaatcaa
ttgatgactggcaaaagataa
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integrated database retrieval system
