Corynebacterium terpenotabidum: A606_07495
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Entry
A606_07495 CDS
T02714
Name
(GenBank) hypothetical protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
cter
Corynebacterium terpenotabidum
Pathway
cter03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cter00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A606_07495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cter03019
]
A606_07495
03009 Ribosome biogenesis [BR:
cter03009
]
A606_07495
Enzymes [BR:
cter01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
A606_07495
Messenger RNA biogenesis [BR:
cter03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
A606_07495
Ribosome biogenesis [BR:
cter03009
]
Prokaryotic type
rRNA helicases
A606_07495
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_dimer
ResIII
CMS1
AAA_22
UvrA_inter
HEM4
Cas3-like_C_2
adh_short
Motif
Other DBs
NCBI-ProteinID:
AGP31146
UniProt:
S4XF30
LinkDB
All DBs
Position
complement(1755736..1757970)
Genome browser
AA seq
744 aa
AA seq
DB search
MTDTENVSGDDNQPDTSQSTVPQNDLLETPVETTPGVGDNVGADDSEKTADGNATEESSA
STDETTDNTTDETVDTATEEISETEASNGFDGLGLPDRILDAVRKVGYVTPSPIQSMTIP
ALMEGRDVVGLAQTGTGKTAAFALPALSRLDVNERHPQVLVLAPTRELALQSADAFESFA
AQLGGVNILPIYGGAPYGAQLSGLRRGAHVVVGTPGRVIDHLEKGSLDLSQLRFLVLDEA
DEMLNMGFQEDVERILSDTPDSRQVALFSATMPSAIRRLSKQYLNDAVEYSVKSEQRTND
NITQDYLMVSHRNKLDALTRILEVTEFEAMILFVRTKSDTEELAEKLRARGFEAAAINGD
IAQNQRERTVDQLKDGRLDILVATDVAARGLDVDRITHVFNYDIPRDTESYVHRIGRTGR
AGRSGRAILFVTPRERRLLKNIERVTKSHLNEIELPSVDEVNNARKAKFFASITEALGGS
EVDVFRDLVTGYVEANDVTPTDVAAALAAKMQGKEPFYTKEIQEPQRRERRTRDDRDFDD
SPGVHRPFSERFSKEAPKVTDRNGKELAVYRVSVGHRQRVRPGAIVGALANEGGLNSRDF
GRISIFSEHSLVELPADLPKEVFEQLDQTRISGKLINIEPDPGAPAGRPGRNRRDRDDRD
GGESRGGRGGYSRGRDDRGGRGERGDRYSDRGRFDRDRGNRDHGSRDHGGRSSWRGNRND
RYDRNDRNDRGGDRGGYRGRRDRD
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgactgacactgagaacgtttccggcgacgataaccagccggacacctcccagtcgacg
gttcctcagaacgatctgctcgagaccccggtggagaccaccccgggtgtcggtgacaac
gtgggcgcagatgattccgagaagaccgcggacgggaacgccaccgaagaatcatctgca
tcgaccgacgagaccacagacaacaccacagacgagacggtggacacggccaccgaagaa
atctccgagaccgaggcgtccaacggattcgacggcctcgggctgcccgaccgcatcctc
gacgcggttcgtaaggtcggctacgtcaccccgtccccgatccagtcgatgaccatcccg
gctctcatggaaggacgcgacgtcgtcggtctggcccagaccggtaccggcaagaccgcc
gccttcgcactgccggcactgtcccggctcgacgtcaacgagcggcacccccaggtgctc
gtcctggcaccgacccgtgagctcgccctccagtcggcggacgccttcgagtcctttgcc
gcccagctcggtggcgtgaacatcctcccaatctacggtggtgccccctacggtgcccag
ctgtccggtctccggcgcggcgcgcacgtggtggtcggtaccccgggccgggtcatcgat
cacctggagaagggcagcctcgacctgtcgcagctgcgtttcctggtcctcgacgaggcc
gacgagatgctgaacatgggtttccaggaagatgtcgagcgcatcctctcggacacccct
gactcccgccaggtcgccctgttctccgccacgatgccgtcggcgatccggcggctgtcc
aagcaatacctcaatgacgccgtggagtactcggtcaagtccgagcagcggaccaacgac
aacatcacgcaggactacctgatggtgtcgcaccgcaacaagcttgacgccctgacccgc
atcctggaggtcaccgagttcgaggcgatgatcctcttcgtccgcaccaagagcgacacc
gaggaactcgccgagaagctccgggcccggggtttcgaggctgccgcgatcaacggcgac
atcgcccagaaccagcgtgagcggaccgtcgaccagctcaaggacggccgactggacatc
cttgtggccaccgacgtcgccgcccgtggcctcgatgtcgaccggatcacccatgtcttc
aactacgacatcccgcgggacaccgagtcctacgtccaccgcatcggtaggacgggccgg
gccggtcgtagcggtcgggcgatcctcttcgtcaccccgcgtgagcgtcgcctgctgaag
aacatcgagcgggtcacgaagtcgcacctcaacgagatcgagctgcccagcgtcgacgag
gtcaacaacgcccgcaaggcgaagttcttcgcctcgatcaccgaggcactcggcggcagc
gaggtggacgtcttccgtgacctggtcaccggctacgttgaggcgaatgacgtcaccccg
accgatgtcgcggccgccctcgcggccaagatgcagggtaaggagcccttctacacgaag
gagatccaggaaccgcagcgtcgggaacgtcgcacccgtgacgaccgcgacttcgacgac
agccccggcgtccaccggccgttctccgagcgtttctcgaaggaggctccgaaggtcacc
gaccgtaacggcaaggaactggccgtgtaccgcgtcagcgtcggccaccgtcagcgggtg
cgtcccggggccatcgtcggtgcgctggccaatgagggcggtctgaactcccgtgacttc
ggacggatcagcatcttctccgagcactccctggtggagctgccggcggacctgccgaag
gaggtcttcgaacagctcgaccagacccgcatctccggcaaactgatcaacattgagccc
gatccgggtgctccggccggacgaccgggccggaaccgtcgggaccgcgacgaccgcgac
ggtggcgagagccgcggcggccgcggcggttacagtcgtggccgcgacgaccgaggcgga
cgcggtgagcgtggcgaccggtactccgaccggggccgtttcgaccgggaccgcggaaac
cgtgaccacggcagccgcgaccacggtggacgcagcagctggcgtggcaaccggaatgac
cggtacgaccgcaatgaccgcaacgaccggggtggggaccgcggcggttaccgtggacgg
cgtgaccgcgactag
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