Comamonas testosteroni TK102: O987_01885
Help
Entry
O987_01885 CDS
T03218
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
ctes
Comamonas testosteroni TK102
Pathway
ctes03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ctes00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
O987_01885
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ctes03400
]
O987_01885
Enzymes [BR:
ctes01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
O987_01885
DNA repair and recombination proteins [BR:
ctes03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
O987_01885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AIJ44566
UniProt:
A0A076PIM4
LinkDB
All DBs
Position
403954..407541
Genome browser
AA seq
1195 aa
AA seq
DB search
MTAEQQPRASQPAANWQPGLIAIHGNQTEALADTVLAWLAAHPLQALEPEIVLVQSNGMA
EWFKMRMAEQQGVCAAAQVELPARFVWRSYRQILGRHEVPRESPLDKTPMIWRLMRLLPQ
CLGEPAFAPIASFLRPAEPQRLLQLAEKLADLFDQYQIYRADWLAAWEQGEDVLRTAGRP
DAPVPEGQLWQPQLWRKVLAELDEQERAATRPALLARILGALQSGQPPVTPLARRVVVFG
MSQMPLSLMQFLSGIAQHSQVLIAVPNPCRFHWADAIDGRELLRQQRRRHADKGGKDLAQ
IPLAAMHAHAHPLLAAWGRQSRDYVRQLDAFDTTGDTAVQWGWPRVDVYDEADASELIDA
PLLTQVQQRIRDLVPMSEHPAVEIAAADQSIVFHKAHGLVRELEVLHDQLLQWLAEPVAA
GRAALAPREVVVMLPSIEEAAPAIRAVFGQYGRHDARHIPFDIADVGARASSPLVTALQW
LLKLPQQRCRLSELCDLLDVPAVAARVGLAADDLPQLTHWMVGAGIRWGLNHAQRAQLGL
AACGDPNSAWFGLRRMLLGYASGPALEAAFDEAQAFAGMEPYDEVGGLTAELAGSLASLL
GRMLQWWQTAATTAAAEVWAQRFRSLMDDFFVAQGDEDQALCAALDTALVGWQAACEQAG
FDALIPLEVAQEAWLQALSEPALNQRFRAGGVTFCTLMPMRAIPFEVVCLLGMNDGDYPR
RATRVDFDLMALPGHQRPGDRARRDDDRQLMLDALLSARSKLYISWAGRHVRDNSEQPPS
VLVSQLRDYLRQGWQGEGSSGLCASERGDLLLAQRTRQHPLQPFSRRYFEQASGLSTFAR
EWYGAHEQRAAQALPVVAAFEPDPEVPLTLARLTEFLRHPARSFLRNRLQVRFEQDEELL
EDDELFSVDGLTAYGLIQQLQQGVRTQLAHDAALDVGLQVQRQVQRLGRAGVLPLAGLGR
REAEALQAQATPSLLAWQQQMRQWPHAAPRERLLLHSGAVTLDDWMDGLQEREEPSSDAG
YSRCWFALEPRTLLNKKGELQAHKLLPIYVRSLALSSTGTDTLMGVIARDTLVWVQPLEP
EVATQRLQALMQLWLAGQNEPLPLPLKAAIAAGLDDLSAAAQAYEGGYMLGGECEDPSWA
RCYPDWEALTADLRFHALAKQVYGPLHDWLAAQVQIEGLPLMQRADQDEQPGEPA
NT seq
3588 nt
NT seq
+upstream
nt +downstream
nt
gtgacagcagagcagcaaccaagggcgtcgcaaccggccgcgaactggcagccgggcctg
atcgccatccacggcaaccagaccgaggcgctggccgacaccgtgctggcctggctggcg
gcgcatcccttgcaggcgctggagcccgagatcgtgctggtgcaaagcaacggcatggcc
gagtggttcaagatgcgcatggccgagcagcagggcgtgtgcgccgcagcacaggtcgag
ttgccggcgcgctttgtctggcgcagctaccggcagattctgggcaggcacgaggtaccg
cgcgaatcgccgctggacaagacgcccatgatctggcgcctgatgcgtctgctgccgcag
tgtctgggcgagccagcgtttgcgcccattgccagctttctgcgccccgcagagccgcag
cgcctgctgcagctggccgaaaagctggccgacctgttcgaccagtaccagatctaccgc
gccgactggctggccgcctgggagcagggcgaggatgtgctgcgcacggcgggccgcccc
gacgcgcccgtgcctgaagggcagctctggcagccccagctatggcgcaaggtgctggcc
gagcttgatgagcaggagcgtgccgccacccgcccggccctgctggcacggattctgggc
gcgctgcaaagcggtcagccgccggtcacgccgctggcgcgccgcgtggtggtgttcggc
atgagccagatgcctctgtcgctgatgcagtttctgagcggcattgctcagcacagccag
gtgctgattgccgttcccaacccctgccgctttcactgggccgatgccatcgacgggcgc
gagctgctgcgccagcagcgccgccgccatgccgacaagggcggcaaggacctggcgcag
attcccctggcagccatgcacgcccatgcccatccgctgctggcggcctggggacgacag
agccgcgactatgtgcgccagctcgatgccttcgacaccacgggcgacactgccgttcaa
tggggctggccgcgtgtggatgtgtatgacgaggccgatgcaagtgagctgatcgacgca
ccgctgctgacccaggtgcagcagcgcattcgcgatctggtgcccatgtcggagcaccct
gcggtcgagatcgcagcggcagaccagtccattgtctttcacaaggcccatggcctggtg
cgcgagcttgaagtgctgcatgaccagctgctgcaatggctggccgagcctgtcgctgcg
ggccgcgccgcgctggcgccgcgcgaggtggtggtcatgctgccgtcgatcgaagaggcg
gcacccgccatccgcgcggtgttcggccagtatggccgccacgatgcccgccatattccg
tttgacattgccgacgtgggcgcgcgcgccagcagcccgctggtgaccgcgctgcaatgg
ctgctcaagctgccgcagcagcgctgccgcctgagcgagttgtgcgacctgctcgatgtg
cccgccgtggcggcgcgcgtggggctggcggccgacgatctgccccagctcacgcactgg
atggtcggcgcaggcattcgctgggggctcaaccatgcgcagcgcgcccagctgggtctg
gcggcctgcggtgatcccaacagcgcctggttcggcctgcgccgcatgctgctgggctat
gccagcggaccggcgctggaggccgccttcgacgaggcacaggcttttgccggcatggag
ccctatgacgaagtgggcggcctgacggccgagctggccggatcgctggccagcttgctg
gggcgcatgctgcagtggtggcaaacggctgcaacgaccgcggctgccgaggtctgggcc
cagcgttttcgcagtctgatggacgacttctttgtcgcgcagggcgatgaggaccaggcc
ctgtgcgccgcactcgacacggccctggtcggctggcaggccgcctgcgagcaagcgggc
ttcgatgccctgattccgctggaggtggcgcaggaggcctggctgcaggccctgtccgag
cccgcgctcaaccagcgttttcgcgccggcggcgtgactttctgcacgctgatgccgatg
cgggccatccccttcgaagtggtgtgcctgctgggcatgaacgatggcgactacccgcgc
cgcgccacgcgagtggacttcgatctgatggccctgcccggtcatcagcgccccggcgat
cgcgcgcgccgcgacgatgaccgtcagctgatgctggatgccttgctgtcggcccgcagc
aagctctatatcagctgggccggccgccatgtgcgcgacaacagcgaacagcccccctcg
gtgctggtctcgcagctgcgcgactatctgcgccaaggctggcagggcgaaggcagctca
ggcctttgcgccagcgagcgcggagatctgctgctggcccagcgtacccgccagcatcct
ttgcagcccttcagccgccgctatttcgaacaggcttcagggctgtcgaccttcgcgcgc
gaatggtatggcgcgcatgagcagcgggcagcgcaggcgctgccggtcgtggccgccttc
gagcccgaccccgaggtgccgctgacgctggcgcgactgacggaatttctgcgccatccc
gcacgcagctttttgcgcaaccgcctgcaggtgcgctttgagcaggacgaggaactgctg
gaggacgatgagcttttcagcgtcgatggcctgaccgcctacggcctgattcagcagctg
cagcagggcgtgcgcacgcagctggcgcacgatgcggcgctggacgtgggcctgcaggtg
cagcgccaggtgcagcgtctggggcgtgccggcgtgctgccgctggcaggtctcggcagg
cgcgaggccgaggccttgcaggcccaggccacgccgtcgctgctggcctggcagcagcag
atgcggcagtggccccatgcggcgccgcgcgagcggctgttgctgcactccggcgcggtc
acgctggacgactggatggatggcttgcaggagcgcgaagagccgtcctcggatgcgggc
tacagccgctgctggttcgcgctggagccgcgcacgctgctgaacaaaaaaggcgagctg
caggcccataagctgctgcccatttatgtgcgcagtctggcgctttcaagcacgggcacc
gacacgctgatgggggtgatcgcacgcgacaccctggtctgggtgcagccgctggagcct
gaggtggccacgcagcgcttgcaagccttgatgcaactgtggctggcgggccagaacgag
cccttgccgctgcctctcaaggccgccatcgcagccggcctggacgatctgagtgccgcc
gcacaggcctacgaaggcggctacatgctgggcggcgaatgcgaagaccccagctgggcg
cgctgctacccagactgggaggcgctgacggctgatctgcgctttcatgccctggccaaa
caggtctatggcccgctgcatgactggctggccgcgcaggtgcagatcgagggcctgccc
ctgatgcagcgtgcagaccaggacgaacaaccaggagagccggcatga
DBGET
integrated database retrieval system
