Comamonas testosteroni TK102: O987_01895
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Entry
O987_01895 CDS
T03218
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
ctes
Comamonas testosteroni TK102
Pathway
ctes03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ctes00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
O987_01895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ctes03400
]
O987_01895
Enzymes [BR:
ctes01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
O987_01895
DNA repair and recombination proteins [BR:
ctes03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
O987_01895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
Viral_helicase1
UvrD_C_2
SH3_13
AAA_11
Helicase_RecD
AAA_22
PhoH
UvrD-helicase
SLFN-g3_helicase
DEAD
AAA_28
AAA_16
AAA_5
Herpes_Helicase
Mg_chelatase
nSTAND3
ResIII
AAA_24
Motif
Other DBs
NCBI-ProteinID:
AIJ44568
UniProt:
A0A076PG25
LinkDB
All DBs
Position
411347..413437
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AA seq
696 aa
AA seq
DB search
MKGRRKADLQTLDLFAALADGDTIAPGTTDWLAALERLADAGLLRRLDSALAAFVAAQDA
EAGPALLVATAVLAQMEGRGHSCLPLQALAGDPHQILAWPKEAERLQQSLWEQLPGRLAD
WLQALRRSPLVRVVQPGVVAADRGQPLVLLDGAAPLLYLRRYWDYERSVAAHIAQRTAAD
AVALDEPRVRDWLARLFTGSADASTAPDWQKLACALALRGRMSVITGGPGTGKTYTAARL
LALLFATAPDAAQLRVALAAPTGKAAARLKQSIDSSLLELKEAVGRELDLEALVKRMGAA
RTLHSLLGARPDTRRFAHHAGNPLDVDVLIVDEASMIHLEMMAALLQALPPTARLILLGD
KDQLASVEAGAVLGDLCRDAQRGNYAPDTAAYAGRVTGQPLPAQYLAPARALPLAQHTVM
LRESRRFGGPIGQLAQAVNAGDAPAAMALLRTQTQAGLHAELWAREGGDVESVVRSAVQG
RGGMASYAAYAEVLAQHGQGKGRGFATEAEHQQWVRAVLAAFDRYRLLCAVRDGNWGVAG
LNRAVEQALQAMGAIRKEGEWYMGRPVMVTRNDAQLGVFNGDIGMALPSFADPARLRVYF
MQGEHLHHVSTARLAHVETAFAMTVHKSQGSEFEHTALVLAAQGGNVLSRELVYTGITRA
RKAFSLWAEVPGLLVSAMGSPTQRSSGLLGFMESAR
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgaagggccgccgcaaagccgatctgcagacgctggacctgtttgcagccctcgcggat
ggggacacgattgcgccgggcaccacggactggctggccgctctggagcgcctagccgat
gccggcctgctgcgccgcctggacagcgcgctggcggcttttgtggccgcgcaggacgcc
gaggccgggcccgcgctgctggtggccactgccgtgctggcgcagatggaagggcgcggt
cacagctgtctacccctgcaggcgctggctggcgatccccatcagattctcgcctggccc
aaggaggccgagcgactgcagcaatcgctatgggagcaattgcccggccggctggctgac
tggctgcaggccctgcgtcgcagccccttggtgcgtgtcgtgcagccgggcgtggtagcg
gctgaccgaggccagccgctggtgctgctggacggcgctgcgcccttgctgtatctgcgc
cgctactgggactacgagcgcagtgtcgccgcccatattgcccagcgcacggcggccgat
gcggtggcgcttgacgagcccagggtccgcgactggctggcgcggcttttcacgggctcg
gccgatgcctcgacggcgccggactggcaaaaactggcttgcgcgctggcgctgcgcggg
cgcatgtccgtcatcaccggcgggccgggcacgggcaagacctatacggccgcccgcctg
ctggcgctgctgtttgccacggcgccggatgccgcccagctgcgcgtcgcgctggctgcg
ccaaccggcaaggcggcggcgcggctcaagcagtccatcgacagctcgctgctggagctc
aaggaggccgtgggccgtgaactggatctggaagcgctggtcaagcgcatgggggcggca
cgcaccctgcattcgctgctgggcgccaggcccgatacgcggcgctttgcccaccatgcg
ggcaatccgctggatgtcgacgtgctcatcgtcgatgaggcctccatgatccacctcgag
atgatggccgcgctgctgcaggccctgccgcccacggcgcgcctgattctgctgggcgac
aaggatcagctcgcctcggtggaggccggtgccgtgctgggcgatctgtgccgcgacgcg
cagcggggcaattacgcaccggacaccgcggcctatgccgggcgcgtgacgggccagccc
ctgccagcgcagtacctggcgccagccagggccttgccgctggcccagcacaccgtcatg
ctgcgcgagagccgccgctttggcggcccgatcggtcaacttgcacaggccgtgaatgcc
ggcgatgcaccggctgcgatggcgctgctgcgcacgcaaacccaggctggcctgcatgcc
gaactctgggcacgtgaaggcggtgacgtcgagtccgtggtgcgcagcgccgtgcaaggc
cgcggcggaatggccagctatgccgcctatgccgaggtgctggctcaacatggacagggc
aaggggcgcggctttgccaccgaggccgagcaccagcaatgggtgagggccgtgctggcc
gccttcgaccgctaccgcctgctgtgcgccgtgcgcgacggcaactggggcgtggcgggc
ctgaaccgcgcggtggagcaggccctgcaggccatgggcgccatacgcaaggagggcgag
tggtatatgggccgtccggtgatggtcacccgcaacgatgcgcaactgggcgtgttcaac
ggcgacatcggcatggccctgcccagctttgccgacccggcgcggctgcgcgtgtacttc
atgcagggcgagcatctgcaccatgtcagcacggcgcgcctggcccatgtggagaccgca
tttgccatgacggtgcacaagagccaggggtcggagttcgagcacacggcgctggtgctg
gccgcgcagggcggtaacgtgctcagccgcgagctggtctataccggcatcacgcgggcg
cgcaaggcgttttcgctgtgggccgaagtgcccggcctgttggtgtcggcgatgggcagt
cccacgcagcgcagcagcggtttgctgggattcatggagagtgctcggtag
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