Comamonas testosteroni TK102: O987_05115
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Entry
O987_05115 CDS
T03218
Symbol
uvrD
Name
(GenBank) DNA-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ctes
Comamonas testosteroni TK102
Pathway
ctes03420
Nucleotide excision repair
ctes03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ctes00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
O987_05115 (uvrD)
03430 Mismatch repair
O987_05115 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ctes03400
]
O987_05115 (uvrD)
Enzymes [BR:
ctes01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
O987_05115 (uvrD)
DNA repair and recombination proteins [BR:
ctes03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
O987_05115 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
O987_05115 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_12
Viral_helicase1
AAA_30
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AIJ45183
UniProt:
A0A076PHW0
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All DBs
Position
1120672..1123155
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AA seq
827 aa
AA seq
DB search
MFPIDLLDSAPDGANSGANPASHSPLLTGLNDEQLAAVTLPAGHALILAGAGSGKTRVLT
TRIAWLLQTGQATPGSIMAVTFTNKAAKEMLTRLSAMLPYNVRGMWIGTFHGLCNRLLRA
HYQAARLPQAFQILDTQDQLSAIKRLCKQFNVDDERFPPKQLMYFIAGCKEEGMRPGDVV
ATDPDTRKKVELYQLYEEQCQREGVVDFGELMLRSYELLRDDVHLRHHYQRRFQHILVDE
FQDTNKLQYQWLKQLAGDDVGGRYESAASVIAVGDDDQSIYAFRGARVGNMADFIREFDV
KNQIKLEQNYRSYSNILDCANALISHNNNRLGKNLRTSQGPGEPVRIYEAPSDLAEAAWM
VDEIKQLVKNDGFTRQEIAVLYRSNAQSRVIESALFNSRIPYRVYGGLRFFERAEIKHAL
AYLRLLENPHDDTSFLRVVNFPARGIGARTIEVLQDTARSSGTSLSDAVTAVGGAAGTKL
QGFVAQIDVLREQTQGRTLREIIETVEEQSGLIEHYRNEKEGADRIENLQELVTAAESFV
TQEGFGRDAVAMPLDEQQNAPQLSQSPVSQGLDPNQPLLDEALRAPAGTAASMVNADTGE
TLSPLQAFLVHAALEAGDNQAQAGQDAVQLMTVHASKGLEFDAVFIGGVEEGLFPHENAM
MDRGGLEEERRLAYVAITRARKRLYLSHSQTRMLHGQTRYNVKSRFFDELPEEALKWITP
RQSGFGSFAPSSGAGGAWGSRGAGQFGSGSGWGGKQTEVFASPPVPQQKAEPAHGIKAGI
AVFHNKFGEGKVLAVEGTGDDTRAQVSFGRHGTKWLALAIAKLTIVD
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atgttcccgatcgacctgcttgactccgcgccagacggtgcaaattccggcgccaatccc
gcctctcactcgcccctgctgaccggcctcaacgatgagcagctggccgcagtgaccctg
cctgcgggccatgcgctgattctggcgggtgccggctcgggcaagacgcgtgtgctgacc
acgcgcatcgcctggctgctgcagaccgggcaggccacgcccggctccatcatggcggtg
accttcaccaacaaggccgccaaggagatgctcacgcgcctgtcggccatgctgccctac
aacgtgcgcggcatgtggatcggcacgttccacggcctgtgcaaccgactgctgcgcgcc
cactatcaggcagccaggctgccgcaggcgttccagattctggatacccaggatcagctt
tcggccatcaagcgcctgtgcaagcagttcaatgtggatgacgagcgctttccgcccaag
cagctgatgtacttcattgcgggctgcaaggaagagggcatgcgccctggcgatgtggtg
gcgaccgaccccgacactcgcaagaaagtggagctgtaccagctctacgaagagcaatgc
cagcgcgaaggcgtggtcgattttggtgagctgatgctgcgcagctacgagctgctgcgt
gacgatgtccatctgcgccaccactaccagcgccgctttcagcatattttggtggacgag
ttccaggacaccaacaagctgcagtaccagtggctcaagcaactggcgggcgatgatgtg
ggcgggcgctacgagtcggctgccagcgtgattgccgtgggcgacgacgaccagagcatc
tatgcctttcgcggcgcgcgcgtgggcaatatggcggacttcatccgcgagtttgacgtc
aaaaaccagatcaagctggagcagaactaccgcagctacagcaacatcctcgactgcgcc
aacgccctcatcagccacaacaacaaccgccttggcaagaacctgcgcaccagccagggc
ccgggcgagccggtgcgcatctacgaagcgcccagcgatctggccgaggctgcgtggatg
gttgacgaaatcaagcagctggtcaaaaacgatggcttcacgcgccaggaaattgccgtg
ctctaccgcagcaatgcgcaaagccgggtgatcgagtcggcgctgttcaattccagaatt
ccctaccgtgtgtatggcggcctgcgctttttcgagcgcgccgaaatcaagcatgccctg
gcctatctgcgcctgctggagaatccgcacgacgacaccagtttcctgcgcgtggtgaat
ttccccgcacgcgggatcggcgcgcgcacgatcgaagtcctgcaggacacggcgcgcagc
agcggcacttcgctgagcgacgccgtcaccgccgtgggcggcgcggcaggcaccaagctg
cagggctttgtggcacagatcgatgtgctgcgcgagcagacgcaagggcgcacgctgcgt
gaaatcatcgagaccgtggaagagcaaagcggcctgatcgagcattaccgcaacgagaaa
gagggcgcggaccgcatcgagaacttgcaggaactggtcacggctgccgagagctttgtg
acccaggaaggctttggccgcgatgccgtggccatgccgctggacgagcagcagaacgcg
ccgcagctgagccagtcgccggtcagccaggggctggacccgaatcagccgctgctggac
gaggcgctcagggcgccggccggtacggcggcctccatggtcaatgccgataccggtgag
acgctgtcgccgctgcaggcctttctcgtgcatgcggcactggaagcgggcgacaaccag
gcccaggcaggccaggatgccgtgcagctgatgaccgtgcatgcttccaagggcctggag
ttcgatgccgtgttcataggcggtgtggaggagggtctgttcccgcacgagaacgccatg
atggatcgcggcggtctggaggaggagcggcgcctggcctatgtggccatcacgcgtgcg
cgcaagcgtctgtatctgagccattcgcagacgcgcatgctgcatggccagacgcgctac
aacgtcaagagtcgcttctttgacgagctgcctgaagaagcgctcaagtggatcacgccc
aggcagagcggctttggcagcttcgccccttcctcaggggctggcggcgcctggggatcc
aggggcgcaggccagttcggctccggctcgggctggggcggcaagcagaccgaagtcttt
gccagcccgcccgtgccgcagcaaaaggccgagcccgcgcacggcatcaaggccggtatc
gcggtgttccacaacaagttcggcgagggcaaggtgctggcggtcgaaggcacgggtgac
gatacacgtgcccaggtcagcttcggccgccatggcaccaagtggctggcgctggcgatt
gccaagctgacaatcgttgactga
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