Comamonas testosteroni TK102: O987_05560
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Entry
O987_05560 CDS
T03218
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
ctes
Comamonas testosteroni TK102
Brite
KEGG Orthology (KO) [BR:
ctes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ctes03016
]
O987_05560
Enzymes [BR:
ctes01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
O987_05560
Transfer RNA biogenesis [BR:
ctes03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
O987_05560
Prokaryotic type
O987_05560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
AIJ45272
UniProt:
A0A076PPG6
LinkDB
All DBs
Position
complement(1226397..1227227)
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AA seq
276 aa
AA seq
DB search
MRIALGVSYNGQAYRGWQSQPDGNTVQDKLEAALGRFAAQEVSTICAGRTDSGVHGLMQV
VHFDTGLQRTPNSWVRGTNTFLPKDIAVQWAAEVADGPDGFHSRACATARRYAYVLLQSP
VRPSVDQGRVGWVFQTLDAQRMRAAADLLLGEHDFSSFRAAGCQAKSPVKTLRRIDIHYR
PAGQAPMRDTQMQCGYWRFEFEGSAFLHHMIRNIMGCLIYVGQGSKPVEWMQQVLEARSR
EVAAPTFSPDGLYFLGPIYDTRWGLPADTPPFAWLP
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatagctcttggcgtcagctacaacggtcaggcctatcgcggctggcaaagccaa
cccgatggcaacaccgtacaagacaaactcgaagcggccctgggccgctttgctgctcaa
gaagtctccaccatctgtgccggtcgcaccgattcgggtgtgcacggcctgatgcaggtc
gtgcactttgacaccgggctgcagcgcacacccaactcctgggtgcgcggcaccaacacc
tttctgcccaaggacattgccgtgcaatgggcggccgaggtggccgacggcccggatggc
ttccattcccgcgcctgtgccaccgcacgtcgctatgcctatgtgctgctgcagtctccc
gtgcgccccagcgtggaccagggccgggtcggctgggtgtttcagacgctggatgcgcag
cgcatgcgcgcagccgccgatctgctgctgggcgagcatgatttttcgtcctttcgcgcc
gcgggctgccaggccaagagcccggtcaagaccctgcgccgcatcgacatccactaccgc
cccgctggccaggcccccatgcgcgacacgcagatgcaatgcggctactggcgcttcgag
ttcgagggcagcgcttttctgcaccacatgatccgcaacatcatgggctgcctgatctac
gtgggccagggctccaagcccgtggaatggatgcagcaggtgctggaagcacgctcgcgc
gaggtggccgcccccaccttctcccctgacggcctgtactttctcggccccatttacgat
acacgctggggtctgcctgccgacacacccccgtttgcctggctgccctga
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