Comamonas testosteroni TK102: O987_08130
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Entry
O987_08130 CDS
T03218
Name
(GenBank) RNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ctes
Comamonas testosteroni TK102
Pathway
ctes03420
Nucleotide excision repair
ctes03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ctes00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
O987_08130
03430 Mismatch repair
O987_08130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ctes03400
]
O987_08130
Enzymes [BR:
ctes01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
O987_08130
DNA repair and recombination proteins [BR:
ctes03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
O987_08130
MMR (mismatch excision repair)
Other MMR factors
O987_08130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C_2
AAA_30
UvrD_C
Motif
Other DBs
NCBI-ProteinID:
AIJ45772
UniProt:
A0A076PQT3
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All DBs
Position
complement(1771891..1773681)
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AA seq
596 aa
AA seq
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MVAGAGSGKTTSLIKAMAHLAETRGPALRRAGQQIACITYTEVAVGEISADVGASPLFHI
STIHSFLWSVIRPFHSDIAAWVAIRIDEKIAERRAHYDKPRTQAKTKARLEQEIADLEAD
LAAISEVEKFVYGTGSSYAEGILGHDDILKLTPACVAAHPLLRQLVAKRFPYIFVDESQD
TNPEVVEALRHIAGEHPGLCVGFFGDPMQKIYMSGAGTVPLNDGWAEITKPENFRCPTSV
LGVINAIRAPGDGLEQVRGRTITVDGIEQPVAGTSNLFILPADAERSARLAAIRQWLAAE
TGDGLWLSDVREGDVRLLVLVHRMAANRLGFPNLYAALNDRAPMSLSEGLSDGTAWPLRP
LVQHILPLVVAAQAGDRFTVISTLRSECPRLEPARLRGQATAPVLTALQQALDGLVGLLA
AGSQATIRDVLTHVRDNELLRLDDRFAMHLVAEPVDDGSSGFENVQAYLACGVDELWAYR
RYFTEESPFATHHGVKGAQFERVLVVIDDEEAGFRQYSYGKYLGYVPLSDKDEANLAAGE
ESVLDRTRRLFYVCCSRATKDLAVVAFVPDVAAARTAIVAQNLFPEAVIRGAEHLG
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atggtcgccggtgcggggtcggggaaaacgacctcgctgatcaaggctatggcgcaccta
gccgagacccgcggtcctgccctgcgccgcgccgggcaacaaatcgcctgcatcacatat
accgaagtcgccgtcggtgagatttcggccgatgtcggggcctcgccgctattccacatc
tcgaccatccacagtttcctgtggtcagtcatccggccgttccattcggatatcgcggct
tgggtagccatccgcatcgacgagaagatcgcggagcgacgcgcacactacgacaagcct
cggactcaggcgaaaacgaaggcccgcctcgaacaggagatcgcagatctcgaagccgat
ctggctgcgatcagtgaagtagagaagttcgtctacggcaccggcagcagctacgctgaa
ggcatccttggccatgacgatatcctcaagctcaccccagcctgcgtcgcagcgcatccg
ctgctgagacaactcgtcgctaagcgctttccctacatcttcgtcgatgagagccaagac
accaatccggaggtcgtcgaggcgttacggcacattgcgggcgaacatcctggcctgtgt
gtcgggttcttcggagacccgatgcagaagatctatatgagcggagcaggcactgtcccg
ctgaacgacggctgggcggagatcacaaagcccgagaacttccggtgcccgacatcggtg
ctcggggtcatcaatgcaatccgcgcccctggcgacggtcttgagcaggtgcgtggtcgg
acgataaccgttgatggcatcgagcagccggttgccggtacctccaatctgttcatcctg
ccggcggacgcggagcggagtgcgcgcctcgcggccattaggcagtggctggccgccgaa
accggcgacggtctgtggctaagcgacgtgcgggaaggcgatgtccgcctgcttgtactg
gtgcaccgcatggcggccaaccggctcgggttccctaatctgtatgctgcgctcaatgac
cgagcccccatgagtctgagtgaagggctgagcgatggcacagcctggccgctccgtcca
cttgtccagcacatacttccgctcgttgtcgcggcgcaagcgggtgatcggttcacagtg
atatcgaccttgcgcagcgaatgcccgaggcttgaaccagcgcggcttcgagggcaagcg
acggcccccgttcttacagcgctacagcaagcgctcgacgggcttgtcggtctgttggca
gcaggatcgcaggcgactatccgggacgtcttgacgcatgtgcgagataacgagttgctg
cgcctcgatgatcgcttcgccatgcatctggttgcagagcctgtggatgacggcagcagc
ggcttcgagaacgttcaagcctatctggcatgcggtgtcgacgaactctgggcctaccgg
cgctactttacagaggagtcaccgttcgcgacgcatcatggggtgaagggtgcccaattt
gagcgcgtattggtcgtcatcgacgatgaggaagcgggcttccggcagtattcttacggg
aagtatctcgggtacgtccccctctcggacaaggacgaagccaacctggcggcaggtgaa
gagtccgtactcgatcgaacccgccgcctcttctatgtgtgctgctcgcgtgcaacgaag
gacttggcagtcgtggcctttgtgcccgatgtcgcagcggctcgcaccgcgatcgtggcg
cagaatctattccccgaggccgtaatccgaggtgcggagcatctgggctga
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