Comamonas testosteroni TK102: O987_09925
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Entry
O987_09925 CDS
T03218
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
ctes
Comamonas testosteroni TK102
Pathway
ctes03030
DNA replication
ctes03430
Mismatch repair
ctes03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ctes00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
O987_09925
03430 Mismatch repair
O987_09925
03440 Homologous recombination
O987_09925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ctes03032
]
O987_09925
03400 DNA repair and recombination proteins [BR:
ctes03400
]
O987_09925
Enzymes [BR:
ctes01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
O987_09925
DNA replication proteins [BR:
ctes03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
O987_09925
DNA repair and recombination proteins [BR:
ctes03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
O987_09925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
AAA
DNA_pol3_tau_5
RuvB_N
AAA_22
AAA_18
AAA_30
AAA_14
AAA_19
AAA_16
Rad17
SKI
nSTAND3
PIF1
TsaE
AAA_28
Herpes_Helicase
DUF815
Motif
Other DBs
NCBI-ProteinID:
AIJ46110
UniProt:
A0A076PR12
LinkDB
All DBs
Position
2136627..2138798
Genome browser
AA seq
723 aa
AA seq
DB search
MSYLVLARKYRPRTFTEMVGQEHVVQALTNALTQQRLHHAYLFTGTRGVGKTTVSRILAK
SLNCQGLDGNGGITATPCGVCAACTEIDSGRFPDYTELDAASNRGVDEVQSLLEQAVYKP
VQGRFKVFMIDEVHMLTNTAFNAMLKTLEEPPEYLKFVLATTDPQKVPVTVLSRCLQFNL
RPMAPETVLEHLTHVLDKESVPAEPQALRLLSRAARGSMRDALSLTDQAIAFGSGQLQEA
TVRQMLGSVDRSHVFRLIDALAQGHGRTVVEVSEELRHNGLSAASTLEEMCAVLQRMAVL
QAVPDMPLDASDPEAAEVDRLASLMPRDETQLLYSICLHGRVELGLAPDEYAALTMALLR
LLAFKPAHAEAGTAEKKTPALRPSRPVVQAPAPIQQPPASPPVAKEVPATEVQSLPSVQQ
PVVQAVPESAPAQEPESVVAMAEPEQIQAVADRSDSAVYSAARPVMQAAPESARSPAPAV
TPEPAAVQQNMAGANQEAAAEADHMPADDASESAEAVDMVDAPEEQDAGEAAWAGMPDEG
WSDDGRWGDDADLDVGQPLHAMPPMESDEPPAQSAGGGYASTAQDAAPVERTPEGDLWFD
VVQQLLQSEAVVAVARQLALQSQLLGREGDLWRLRVESSSLNQAGTRDRLRAALEAAGHA
RQLQVEQGPVTDSPARRLALERQASQLLAEDIVKSNPQVQTLMRDFGAKIVPGSIKPISI
QPE
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgtcttatttagtgcttgctcgcaaataccggccccgtaccttcactgaaatggtgggg
caggagcacgtggttcaggctctgaccaatgcgttgacccagcagcgcctgcatcacgcc
tatctgttcacgggcacacgtggcgtgggcaagaccacggtgtcgcgcattctggccaag
tcgctgaattgccagggcctggatggcaatggtggaatcaccgcaaccccttgcggggta
tgcgcagcatgcactgaaatagatagcggtcgtttccccgactacaccgaactggatgct
gcatccaaccgcggtgtggatgaggtgcagagcctgctggagcaggcggtgtacaaaccg
gtgcaggggcgcttcaaggtcttcatgatcgacgaggtgcacatgctgacgaacaccgcg
ttcaacgccatgctcaagacgctggaggagcctcccgagtatctgaagttcgtgctggcc
acgaccgatccgcagaaagtaccggtcactgtgctctcgcgctgcctgcagttcaatctg
cgcccgatggcgcccgaaacggttctggagcacctgactcatgtgctggacaaggaaagc
gtgccggcagagcctcaggcgctgcgattgctgtctcgcgcagcgcgcggctccatgcgc
gatgcgctgagcctgaccgaccaggcgattgcctttggcagcgggcagttgcaggaggcg
acggtgcgccagatgctgggcagcgtggatcgaagccatgtctttcgcctgatcgatgcc
ctggcgcaggggcacgggcgcacggtggttgaagtctccgaagagctgcgccacaacggt
ctgtctgctgcatcgacactggaggaaatgtgcgccgttctgcagcgcatggccgtgttg
caggccgtgccggatatgccgctggatgccagcgacccggaggctgccgaagtagaccga
ctggccagtctgatgccccgcgacgagacgcagctgctctacagcatctgcctgcacggc
cgcgtcgagctgggactggccccggatgagtatgcggcgctgaccatggcgctgctgcgg
ctgctggccttcaagccggcacatgccgaagccggcacggctgaaaaaaaaactccggcg
ctgaggcctagccggcctgttgtccaggctccggcgccgattcagcagcctccggcttca
ccgccggtggcgaaggaggtgccagcgaccgaggtccagtccttgccgtctgtgcagcag
cctgttgtgcaagccgtaccggagtcggcaccagcgcaagagcctgagtcagtcgtcgcc
atggccgagcctgaacagattcaagcggttgccgatcgctcggattcagctgtgtattcc
gctgcaaggcctgtgatgcaggcagccccggagtcggcccggtcgccagcgcctgccgtg
acgcctgagcctgctgcggttcagcaaaacatggctggtgcgaatcaggaagccgccgcc
gaggcagaccatatgcctgccgacgatgcgtccgagagcgccgaggccgtcgatatggtt
gatgctcccgaagagcaggatgccggcgaagcggcctgggcaggcatgcccgatgagggc
tggtctgacgatgggcgctggggcgatgatgccgacctcgatgtcggccagcccctgcat
gccatgccgcccatggagtcggatgagccgccagcccagagcgcaggcggcggctatgcc
agcacggcccaggatgcagcccccgtggaacgcacccccgagggcgatctgtggtttgac
gtggtgcagcagttgttgcagagcgaagccgtggtggcagtggcgcggcaactggcgctg
cagtcgcagctgctgggtcgtgaaggcgatctgtggcgactgcgcgtggagtccagctcg
ctgaatcaggctggcacgcgtgatcgtttgcgtgctgcgctggaagcggccggtcatgcg
cgacaattgcaggtcgagcaagggccggtgacggacagtcctgcccgccgactggccctg
gaaagacaagccagccagttgctggccgaggacattgtcaaaagcaatccgcaggtgcaa
accttgatgcgagactttggcgcgaaaatcgtgcccggtagcatcaagcccatatctatt
cagcctgaataa
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