Comamonas testosteroni TK102: O987_11880
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Entry
O987_11880 CDS
T03218
Name
(GenBank) RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
ctes
Comamonas testosteroni TK102
Pathway
ctes02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ctes00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
O987_11880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ctes03021
]
O987_11880
Transcription machinery [BR:
ctes03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
O987_11880
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
PhyR_sigma-like
Sigma70_r4
DUF6197
HTH_23
HTH_7
Motif
Other DBs
NCBI-ProteinID:
AIJ46494
LinkDB
All DBs
Position
2537568..2538074
Genome browser
AA seq
168 aa
AA seq
DB search
MSAVESVIHREVTALYIDHHGWLQGWLRKKVGNAFDAADLAQDTFVRILGVREPQEIESP
RAYLTTVAKGVLVNWCRRQALERAYLDALALLPEPEVPSPEHRALVLEALHEIDAMLDAL
PPLVRRTFLLSQLEDMRYDAIALQLGVSLSSVKRYMAQAFRHCLALMD
NT seq
507 nt
NT seq
+upstream
nt +downstream
nt
atgtccgctgtcgaatccgtcatccaccgcgaagtcactgcgctttacatcgaccatcac
ggctggttgcagggctggttgcgcaaaaaggtcggcaatgccttcgatgcggccgatctg
gcgcaggacaccttcgtgcgcatccttggtgtgcgcgagccgcaggagatagagtcgccg
cgtgcctatctgaccacggtggccaagggcgtgctggtcaactggtgccggcgccaggcg
ctggagcgcgcctatctggatgcgctggccctgctgcccgagcccgaagtgccttcgccc
gagcaccgggccctggtgctggaggccttgcatgagatagatgccatgctcgatgccttg
ccgcccctggtgcgccgcaccttcctgctgtcgcagctggaagacatgaggtacgacgcc
attgcgctgcaactgggcgtgtcgctgagcagcgtcaagcgatacatggcccaggctttc
aggcattgcctggcgctgatggattga
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integrated database retrieval system