Comamonas testosteroni TK102: O987_12055
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Entry
O987_12055 CDS
T03218
Name
(GenBank) RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
ctes
Comamonas testosteroni TK102
Pathway
ctes02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ctes00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
O987_12055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ctes03021
]
O987_12055
Transcription machinery [BR:
ctes03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
O987_12055
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_ECF
Sigma70_r4
HTH_23
GerE
HTH_40
PhyR_sigma-like
Xre-like-HTH
MarR
HsdM_C
HTH_28
HTH_11
TnsD
HTH_38
HTH_36
Motif
Other DBs
NCBI-ProteinID:
AIJ46527
LinkDB
All DBs
Position
complement(2577241..2577816)
Genome browser
AA seq
191 aa
AA seq
DB search
MGIICVESADFQSREIPVSSPANSIASDALGSIYTLHNRWLTAWLQRKLGNRHDAADIAQ
DTFTRIWATAKSQAIEDIREPKAYLTTVARRLMINHLERRSLEQAYLASLHLLPEETALS
AEARAILLETLEELDQLLGELPAKVRTTFLLSQLEGLSYEEIASHMQLSVRTVTRYMAQG
FRQCLRVMLDS
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
atgggtatcatttgtgtagaatcagcggatttccaatcccgagagattcctgtgtcatcc
cctgccaacagcatcgccagtgacgcacttggcagcatttacacactgcacaaccgctgg
ctgaccgcctggctgcagcgcaagctgggcaatcgtcacgatgcagcagacatcgctcag
gacacattcacgcgcatctgggcgactgcaaaatcgcaagccatcgaggacatccgcgag
cccaaagcctatctgaccacagtcgccaggcgcttgatgatcaatcacctggaacgcagg
tcgcttgagcaggcctatctggcatccctgcatctgctgcccgaagaaacagcactgtct
gccgaggctcgcgccatcctgctggagactctggaggagctggatcagttgctcggcgag
ctgccggccaaagttcgcaccacatttctgctttcccagctggaagggctctcttacgaa
gagattgcatcgcatatgcaattgagtgtgcgcacggtcacccgctatatggcgcagggc
ttccggcaatgcctgcgtgtaatgctggatagctga
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