Comamonas testosteroni TK102: O987_13120
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Entry
O987_13120 CDS
T03218
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ctes
Comamonas testosteroni TK102
Pathway
ctes03030
DNA replication
ctes03430
Mismatch repair
ctes03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ctes00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
O987_13120
03430 Mismatch repair
O987_13120
03440 Homologous recombination
O987_13120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ctes03032
]
O987_13120
03400 DNA repair and recombination proteins [BR:
ctes03400
]
O987_13120
Enzymes [BR:
ctes01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
O987_13120
DNA replication proteins [BR:
ctes03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
O987_13120
DNA repair and recombination proteins [BR:
ctes03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
O987_13120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AIJ46742
UniProt:
A0A076PTP1
LinkDB
All DBs
Position
2812890..2816423
Genome browser
AA seq
1177 aa
AA seq
DB search
MFVHLRLHTEFSVVDGTTRVNAMIKAAAEDGQVAMAITDFNNLFGGIKFYREGRGKGVKP
LLGAEIVLEGLGDAPPSRVIVLVQSRQGYHNIAELLARGWTRNVVRDQAQHKWEWLQELG
EGLIVLSGAQAGPVGIALTRGDEKGAAEIAQRLATMFPHRFYIELQRAGRPDDESHVLAA
VKLASRLNLPVVATHPIQYAKPDDYEAHEARVCIAEGEILGNAKRVRKFTRDQYFKTAAE
MEQLFCDIPSAIENTVEIARRCSLTLELGNPQLPNFPVPSGMSMDEFFRHESYQGLEERL
VHLYPDVVKRDAQRARYVERLEFELGTIMKMGFPGYFLIVSDFIKWAKANGCPVGPGRGS
GAGSLVAYVLKVTDLDPLEYNLLFERFLNPERVSMPDFDVDFCQQNRDRVIDYVKDRYGR
DAVSQIATFGTMAARAAIRDVGRVLDMSYTFCDGISKLIPNKPGLHVTLKYPPNPPKEGD
KYTYAIKEEPILAERIEREEDVKTLIEMAQSLEGMTRNIGMHAGGVVIAPGRLADFCPLY
QQPGSTSAVAMYDKDDVEAVGLVKFDFLGLATLTILEIAREFIMKRHKGQENFQFENIPL
DDYPTYKLFSDGKTEAVFQFESRGMQQMLKEAKPSRLEDLIALNALYRPGPMDLIPTFIA
RKHGQEVVEYPHPLVESVLAETYGIMVYQEQVMQTAQVLGGYSLGGADLLRRAMGKKKVE
EMVKHRGIFREGAAKNGLSEEKADEVFDLMEKFAGYGFNKSHAAAYSLLAYHTGWLKVHY
TAEFYCGNMTVEMDNTDKLKVLYEDALKMGITFEMPDVNRGVHRFEPVTDKVIRYGLGAI
KGTGQAAIEAIVAARNGEGTGPNGHETGPFKSLFDFCLRVDRSRINKRTVEALIKGGAFD
SIDMNRASLMATLDTAFGFAATSIANADQGGLFDMMGDDALGSSTAEPPMADVLPWGVKE
KLTLEKTAIGFYLTGHLFDEVEAEVRRFVRTPIGEMRDSREPQTMAGIIGGLRTINGQRG
KLSIFTLDDKSAVIEASVDEKTMAACADVLKEDEFVVVSGRLQPDRFSGGLRMKVQQMWS
LADARCRFARYLQVSVGEKMPDVPALLRQFPAKVEETENGNLNHGVKVRLDLICRDERGS
ASCELALGEGSRFYPSDAALAAWYGSAGTGQVKVVYE
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtccatctgcgcctgcacaccgaattttccgtcgtcgacggaaccacccgcgtc
aatgccatgatcaaggctgctgccgaagacgggcaggtggcgatggccattaccgacttc
aacaacctgtttggcggcatcaagttctaccgcgaaggtcgcggcaagggcgtcaagccc
ctgctgggagccgagatcgtgctcgaggggctgggcgatgcgccgccttcgcgggtcatc
gttctcgttcagagccgccagggctaccacaatatcgccgagctgctggcgcgcggctgg
acgcgcaatgtggtgcgtgaccaggcgcagcacaaatgggaatggctgcaggagctgggc
gagggactgatcgtgctgtccggcgcgcaggccggtccagtgggcattgccctgacgcgt
ggtgatgaaaaaggcgcggccgagattgcccagcgcctggccaccatgttcccgcaccgc
ttctatatcgagctgcagcgcgcgggccgtcccgatgacgagtcgcatgtgctggcggcc
gtgaagctggccagccgtctgaacctgccggtggtcgcgacccacccgattcagtatgcc
aagcccgacgattacgaggcgcacgaggcccgggtctgcatcgccgagggcgagatcctg
ggcaatgccaaacgggtgcgcaagttcacccgcgaccagtatttcaagactgccgccgag
atggagcaactgttctgcgacatcccgagcgcgatcgagaacacagtggaaattgcccgc
cgctgcagtctgacgctggagctgggcaacccgcaactgcccaatttccccgtgccgtcc
ggaatgagcatggacgagttcttccgccacgagtcctaccaggggctggaagagcgtctg
gtgcacctctatcccgatgtggtcaagcgcgacgcccagcgtgcgcgctatgtggagcgg
ctggagttcgagctgggcaccatcatgaagatgggctttccgggctacttcctcatcgtg
tcggactttatcaagtgggccaaggccaacggctgccccgtggggccgggccgtggctcg
ggtgccggctcgctggtggcttatgtgctcaaggtgaccgacctcgacccgctggaatac
aacctgctgttcgagcgtttcctgaaccccgaacgcgtgtccatgcccgactttgacgtg
gatttctgccagcagaaccgcgaccgcgtgatcgactatgtcaaggatcgctacggtcgc
gatgccgtcagccagatcgccaccttcggcaccatggccgcgcgtgcggccatccgcgac
gtgggacgcgtgctggacatgagctacaccttctgcgacggcatctccaagctgatcccg
aacaagcccggcctgcatgtcacgctcaagtacccgccgaatccgcccaaggaaggcgac
aaatacacctacgccatcaaggaggagcccatcctggccgagcgcatcgagcgcgaggag
gacgtcaagaccctgatcgagatggcgcagagcctggagggcatgacccgcaacatcggc
atgcacgccggcggcgtggtgattgcgccgggccggctggccgatttttgtccgctctac
cagcagcccggcagtacctcggccgtggccatgtacgacaaggacgacgtggaagccgtg
ggcctggtgaagttcgacttcttgggcctggccacgctgacgattctggagattgcgcgc
gaattcatcatgaagcgccacaagggccaggagaacttccagttcgagaacattccgctg
gacgactacccgacctacaagctgttctccgacggcaagaccgaagccgtcttccagttt
gaatcgcgcggcatgcagcagatgctcaaggaggccaagccctcgcgcctggaagacctg
attgcgctgaacgccctctaccgtcccggccccatggacctgatccccaccttcattgcc
cgcaagcacgggcaggaagtcgtggagtacccgcatccgctggtcgagtcggtgctggcc
gaaacctacggcatcatggtctaccaggagcaggtgatgcagaccgcccaggtgcttggc
ggctactcgctgggcggcgccgacttgctgcgccgggccatgggcaagaaaaaagtcgag
gagatggtcaagcaccggggcatcttccgcgagggtgcggccaagaacgggctgtccgag
gaaaaggccgacgaggtcttcgacctgatggagaagttcgcgggctacggcttcaacaag
tcgcacgcggcagcctactccctgctggcctatcacacgggctggctcaaggtgcattac
acggccgagttctactgcggcaatatgaccgtggaaatggacaacaccgacaagctcaag
gtgttgtacgaggatgcgctcaagatgggcatcaccttcgagatgcccgatgtgaaccgc
ggcgtgcaccgcttcgagccggtgaccgacaaggtcatacgctacggcctcggggccatc
aaggggaccggtcaggcggccatcgaagccatagtggccgcgcgcaacggcgagggcaca
ggccccaacggccacgagacggggccgttcaagagcctgttcgacttctgcctgcgcgtg
gaccgcagccgcatcaacaaacggacggtggaagcgctgatcaagggcggtgcctttgat
tccatcgacatgaaccgcgcatcgctgatggcgacgctggacaccgccttcggctttgcc
gccacctcgatcgccaatgccgatcagggcggtctgttcgacatgatgggcgacgacgcg
ctgggctcgagcacggcggagccgcccatggccgatgtgctgccctggggcgtcaaggaa
aagctgacgctggagaagacggccatcggcttctatctgacgggccacctgttcgacgag
gtcgaggccgaagtgcgccgcttcgtgcgcactccgatcggcgagatgcgcgacagccgc
gagccgcagaccatggccggcatcatcggcgggctgcgcaccatcaacggccagcgcggc
aagctcagcatcttcacgctggacgacaaatcggcggtgatcgaggcctcggtcgacgaa
aaaaccatggcagcctgcgccgatgtgctcaaggaagacgagtttgtcgtggtttcgggg
cggcttcagcccgaccgcttcagcggcggcctgcgcatgaaggtgcagcagatgtggagt
ctggccgatgcgcgctgccgttttgcgcgctatctgcaggtcagcgtgggggagaagatg
cccgatgtgccggcgctgctgcgccagtttccggccaaggtcgaggaaaccgagaacggc
aatctcaaccacggcgtcaaggtgcgtctggacctgatctgccgcgacgagcgcggttcg
gccagctgcgagctggcgctgggcgagggcagccgcttctacccctcggacgccgcgctg
gcggcctggtatggctccgccggtaccggtcaggtcaaagtggtctatgaataa
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