Comamonas testosteroni TK102: O987_24540
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Entry
O987_24540 CDS
T03218
Name
(GenBank) ribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
ctes
Comamonas testosteroni TK102
Brite
KEGG Orthology (KO) [BR:
ctes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ctes03016
]
O987_24540
Enzymes [BR:
ctes01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
O987_24540
Transfer RNA biogenesis [BR:
ctes03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
O987_24540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Myosin_N
Tiam_CC_Ex
ProQ_C
Motif
Other DBs
NCBI-ProteinID:
AIJ48982
UniProt:
A0A076PZU9
LinkDB
All DBs
Position
5207652..5209721
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AA seq
689 aa
AA seq
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MHALFEEAGKFLAGRILSEAESSAQVELDSGKRVKVKAANILLKFEKPAPAELIAQGQAQ
AAEIDLDLAWEFAPEEEFGFADLARDYFSESATLAQQAGALFRLYDAPHYFRRAGKGRFK
KAPAEILQQALAAIEKKKQIQAQIDTWAEELGRCECPQAIREQLYKILFKPDKNAPEYKA
VVDASRATKLAPLELLHRAGAIDSSYQFHWKRFLFDNFPKGTGFPAVQAPQPPADLPVAN
VQAFSIDDSATTEIDDALSVTGLGTGTVTVGIHIAAPGLAITPGGELDKLGRARLSTVYM
PGYKITMLPDDVVHIYTLDEGRSNPAVSLYVQINEETLETVSSETRLERVPVEVNFRYDK
LDHIVTEEWLTDSSIQVENTPDSLQGKRKELTFLQRWSKFLKANREVVRGKPENFNRPDY
NFRLVGNDGAEPNGSEQVQITVRKRGAPLDLIVAEAAIVANSTWGLMLAEHGVPGIYRSQ
ASLAPGVKVRMSTKALPHAGIGVKAYSWATSPLRRYVDLVNQWQIIACARHGKTAALAAP
FKPKDAELFGIISSFDGAYSAYNGYQAGMERFWTLKYLEQNGITELTASVFKEGPNGSFL
VRADNLPLVLPVLGAQNLPRAAHVRVRLGEIDEISLDISGTLIERLDADAEAGNDSEDSG
EDDDDTVAGPISIAVDMNDADPAADQPKS
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgcacgcactgtttgaagaagccggcaaatttctggccgggcgcatcctctccgaagcc
gaatcctcggcccaagtcgaactggactcgggcaagcgggtcaaggtcaaggccgccaat
atcctgctcaaattcgagaagccggcgcctgccgagctgatcgctcagggccaggcccag
gccgccgagatcgatctggatctggcctgggaatttgcgcccgaggaagagttcggcttt
gccgacctggcgcgtgattatttttccgaatccgcgacgctggcccagcaggccggcgcg
ctgttccggctgtacgacgcaccgcattatttccgtcgtgcaggcaagggccgcttcaag
aaggcccctgcggaaatcctgcagcaagccctggctgccatcgagaagaaaaagcagatc
caggcgcagatcgatacctgggccgaggagctgggccgctgcgagtgcccgcaggcgatt
cgcgagcagctctacaagattctgttcaagcccgacaagaacgctcccgaatacaaggcc
gtggtcgacgccagccgcgccaccaagctggccccgctggagctgctgcaccgcgcaggc
gccatcgactcttcctaccagttccactggaagcgcttcctgttcgacaacttccccaag
ggcacgggcttccccgccgtgcaggctccccagccgccggccgatctgcccgtggccaat
gtgcaggctttctccatcgacgactcggccaccaccgaaatcgacgatgcgctgtccgtc
acgggcctgggcacgggcaccgtcaccgtgggcatccacattgccgctcccggtctggcc
atcacgcccggcggcgagctcgacaagctgggccgcgcccgcctgtccacggtctacatg
cccggctacaagatcaccatgctgcccgacgacgtggtgcatatctacacgctggacgag
ggccgctccaacccagcggtctcgctctatgtgcagatcaacgaggaaacgctggagacc
gtctccagcgaaacccgtctcgagcgcgtgcccgtggaagtcaacttccgctacgacaaa
ctcgatcacatcgtcaccgaggaatggctgaccgactcctcaatccaggttgaaaacacg
cctgactccttgcagggaaagcgcaaggagctcacctttttgcagcgctggtccaaattc
ctcaaggccaatcgcgaagtggtgcgcggcaagcccgagaacttcaaccgcccggactac
aacttccgcctcgtcggcaacgacggcgccgagcccaacggcagcgagcaggtgcagatc
accgtgcgcaagcgcggcgcaccgctggacctgatcgtggccgaggccgccatcgtggcc
aacagcacctggggcctgatgctggccgagcacggtgtgcccggcatctaccgcagccag
gccagcctggcacccggcgtcaaggtgcgcatgagcaccaaggccttgccgcatgcaggc
ataggcgtgaaggcctactcctgggccacctccccgctgcgccgctatgtggatctggtc
aatcagtggcagatcattgcctgtgcccgccacggcaagacggcggccctggccgccccg
ttcaagcccaaggatgccgagctgttcggcatcatcagcagctttgacggcgcctacagc
gcctacaacggctatcaggccggcatggagcgcttctggacgctcaagtatctggagcag
aacggcattaccgagctcacggccagcgtcttcaaggaaggccccaacggctccttcctg
gtgcgcgccgacaatctgccgctggtgctgcccgtgctgggtgcgcagaatctcccgcgc
gcagcccatgtacgcgtcaggctcggcgagatcgacgagatctcgctggacatctcgggc
acgctgatcgagcgcctggatgcagatgccgaggccgggaacgacagcgaggacagcggc
gaggacgatgacgacaccgtggccggccccatctccattgcggtggacatgaacgacgcc
gatcccgctgcagaccagccaaagtcctga
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