Comamonas testosteroni TK102: O987_24850
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Entry
O987_24850 CDS
T03218
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
ctes
Comamonas testosteroni TK102
Brite
KEGG Orthology (KO) [BR:
ctes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ctes03400
]
O987_24850
DNA repair and recombination proteins [BR:
ctes03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
O987_24850
Archaeal homologous recombinant proteins
O987_24850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
AIJ49043
UniProt:
A0A076PTJ9
LinkDB
All DBs
Position
5278058..5279338
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AA seq
426 aa
AA seq
DB search
MRLLHTSDWHLGQHFMGRSRQAEHQALIDWLLQQVQAHQVDAVLIAGDVFDTGAPASYAR
ELYNQLIARLHQAGVGLLILGGNHDSVSVLDESRDLLRHLGTQVIASTGAPQQHAVTLPL
RGPDARRSDPHGASQPGCIVCALPFIRARDVQQSQAGQSAQDKQLALQTAIQSTYRQVYE
AALDLQQKLQATLGRKLPIIATGHLTTVGASSNESVREIYVGSLEAFPTNAFPPADYIAL
GHIHQPQKVGGMEHIRYSGSPIALGFDEARQTKQVLLVELNESGLQGVTSLPVPVSQAMA
ALRCTLADLPNALKQIAADADPKRATWLDITIEEDDYLADLPARVQALVEELPVQVLRIK
RQRGNSAPQLQSAAMESLDELTPQDVFARRLALETLEPPLQQALTERYRSVVESLSHPEN
LPGSAA
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcttctccacacctccgactggcacctgggccagcacttcatgggccgcagccgc
caggccgaacatcaggccctgattgactggttgctgcagcaggtacaggcccatcaggtc
gacgccgtgctgattgccggcgatgtgttcgacaccggcgcaccggccagctatgcgcgc
gaactctacaaccagctgattgcgcggctgcaccaggccggtgtgggcctgctgattctg
ggcggcaaccatgactcggtcagcgtgctcgacgaaagccgcgatctgctgcgccatctg
ggcacacaggtgattgcctccaccggcgctccgcagcagcatgccgtcaccctgccacta
cgcggtccagatgcacgccgctcagacccacacggtgcaagccagcccggctgcattgtc
tgcgccctgccctttatccgcgcccgcgacgtgcagcaaagccaggccggtcaaagcgcg
caggacaagcagctggccttgcagaccgccattcagtccacctatcgacaggtgtatgaa
gcggccctggacctgcagcaaaagctgcaagccacgctgggccgcaagctgcccatcatc
gccaccggccatctgaccaccgtgggcgccagcagcaacgagtcggtgcgcgagatctat
gtgggctcgctcgaagcctttcccaccaatgctttcccgcccgccgactacattgcgctg
ggccatatccaccagccgcaaaaagtgggcggcatggaacatatccgctacagcggctcg
ccgattgcgctgggctttgacgaagcgcgccagaccaagcaggtattgctggtcgagctg
aacgaaagcggcttgcagggcgtaacgtctctgcccgttccggtgtcccaagcaatggcc
gcgctgcgctgtaccctggccgatctgccaaacgcactgaaacaaatagccgctgacgca
gaccccaagcgcgccacctggctggatatcacgattgaagaggatgactatctggccgac
ctgcccgcccgtgtgcaggccctggtcgaggagttgcccgtgcaggtgctgcgcatcaag
cgccagcgcggcaatagcgcaccgcagttgcaaagcgcagccatggagtcgctggacgag
ctgaccccgcaggacgtgtttgcccgccgcctggcactggagacactggagccgccgctg
cagcaggcgctgaccgagcgctatcgcagcgtggtcgaatccctgagccaccctgagaac
ctccccgggagcgccgcatga
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