Comamonas testosteroni TK102: O987_25570
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Entry
O987_25570 CDS
T03218
Name
(GenBank) DEAD/DEAH box helicase
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
ctes
Comamonas testosteroni TK102
Brite
KEGG Orthology (KO) [BR:
ctes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ctes03009
]
O987_25570
Enzymes [BR:
ctes01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
O987_25570
Ribosome biogenesis [BR:
ctes03009
]
Prokaryotic type
rRNA helicases
O987_25570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Motif
Other DBs
NCBI-ProteinID:
AIJ49184
UniProt:
A0A076PQU8
LinkDB
All DBs
Position
complement(5432434..5433843)
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AA seq
469 aa
AA seq
DB search
MNTSTSAAQASDSTAFSALPLSPEMLANLQQLGYAQMTPIQAASLPLTLQGKDLIAQAST
GSGKTAAFGLPMVDRLNPRWFAVQALVLCPTRELADQVATEIRRLARAQDNIKVVTVYGG
VPSRNQIASLENGAHIVVGTPGRVMDLMERGKLDIGNLKTLVLDEADRMLDMGFLGDIET
VVRQCPVDRQTLLFSATYPEGIASLASRFMRDPQTVKVATQHSAGKIEQRWYEVGAREKV
ATVARLLAHFRPESSIAFCNTKQQCRDVVSELQAQGFSALALFGELEQRERDEVLVQFAN
KSCSVLVATDVAARGLDIADLSAVINVDVTPDPEVHIHRIGRTGRGDAEGLALNLVSMDE
MGSVGKIEQLQGRASQFFPVDELTPAAGGGLLPPMMTIQIIGGRKEKIRAGDVMGAMCAD
FGYSRDQIGKISVNDFSTYVAVDRKIASAACARLNAGKVKGKTVKARLL
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgaacacctccaccagcgccgcccaggcctctgattccaccgctttctcggcgctgccc
ctgtctcccgaaatgctggccaatctccagcagctcggctatgcgcagatgacgcccatc
caggccgccagcctgccgctgaccctgcagggcaaggacctgatcgcccaggccagcacc
ggcagcggcaagacggctgccttcggcctgcccatggtcgatcgcctgaacccgcgctgg
tttgccgtccaggccctggtgctgtgccccacgcgcgaactggccgaccaggtcgccacc
gaaatccgccgcctggcgcgcgcgcaggacaatatcaaggtcgtcaccgtctatggcggc
gtgccctcgcgcaaccagatcgcctcgctggaaaacggcgcccatatcgtcgtcggcaca
cccgggcgcgtgatggatctgatggagcgcggcaagctcgatatcggcaacctcaagacc
ctggtgctggacgaggccgatcgcatgctggacatgggctttctcggcgacatcgaaacc
gtggtgcgccaatgcccggtggatcgccagaccctgctgttctcggccacctaccccgaa
ggcattgcctcgctggccagccgcttcatgcgcgacccgcagaccgtcaaggtcgcgacc
cagcacagcgcgggcaagatagagcagcgctggtacgaagtcggtgcccgcgaaaaagtg
gcaacggtggccaggctgctggcgcacttccgtcccgaatcgagcattgccttttgcaat
accaagcagcaatgccgtgacgtggtgagcgagctgcaggcccagggcttcagcgctctg
gccctgttcggcgagctggagcagcgcgagcgcgacgaggtgctggtgcagtttgccaac
aagagctgcagcgtgctggtcgccaccgatgtggcggcgcgcggcctggacatcgccgac
ctgtctgccgtcatcaatgtggatgtcacgcccgaccccgaggtccacatccaccgtatc
ggccgcaccggccgtggcgatgctgaagggctggcgctgaatctggtgtccatggacgag
atgggcagcgtgggcaagatcgagcagctgcaaggccgtgcttcgcagttcttccccgtg
gacgagctcacgcccgccgctggcggcggactgctgccacccatgatgaccatccagatc
atcggcgggcgcaaggaaaagatccgcgccggcgacgtgatgggtgccatgtgcgccgac
ttcggctacagccgcgaccagatcggcaagatcagcgtcaacgacttttccacctatgtg
gccgtggaccgcaagattgcctcggctgcctgcgccaggctcaatgcgggcaaggtcaag
ggcaagaccgtgaaagccaggttgctgtaa
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