Comamonas testosteroni TK102: O987_25955
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Entry
O987_25955 CDS
T03218
Name
(GenBank) DNA helicase UvrD
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ctes
Comamonas testosteroni TK102
Pathway
ctes03420
Nucleotide excision repair
ctes03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ctes00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
O987_25955
03430 Mismatch repair
O987_25955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ctes03400
]
O987_25955
Enzymes [BR:
ctes01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
O987_25955
DNA repair and recombination proteins [BR:
ctes03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
O987_25955
MMR (mismatch excision repair)
Other MMR factors
O987_25955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
UvrD_C_2
AAA_30
AAA_19
Viral_helicase1
AAA_12
ResIII
DEAD
Motif
Other DBs
NCBI-ProteinID:
AIJ49261
UniProt:
A0A076PX38
LinkDB
All DBs
Position
5519569..5521488
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AA seq
639 aa
AA seq
DB search
MNLQPRLYPGLDQNQALNSEASSLLIRALAGTGKTTTLAIKAVDLIRTQGARKVLMLAYS
EAGIKAIQARLDRLTAVHLEGLHLLTLEQFCARLLEEQGDPVPMLSSALEKNLLIQQAHE
ALLQEAERHAELDIPELSDYFARPLDISAFLAFEAQAKQRMLELDIDASGLGALAYCRDN
ALDYGLYRLLRSYERLRSGPTQEPLFYAPGDCTYALACQLAALDFDAGFTLLQGRFEAVL
FDELQDLDEAALLVLRHLARGNGRFIGVGDFNQHILPGASSIFGDSAQRILQELPAGTGQ
ATLNTTYRFGPLICQELNRLFGVEFEAHYRNASAWFEHRRGDDEDCARQLLDIHATVARL
PRKPQDPPAVLRVILRSPEDSIRLEWLFAHEGVHYACKGMQRFYQRREIALVLAMLWAMP
GCSGTARLSQGILNSAAEGLMRYVRHASPPDRDLLANGLFDMSALGEAPPESDTLRIAAE
LMGRQSAMRRFLAVQIAPDSAAARLLALPAEQCADAGQLCRHPLLQQFFAQAAISREELR
QCLASLQALSQICAGLTVDEFLGRLSLMVQSSIAQHQRQEKPSLQLLTVERSKGHEYDYV
AVPFVHARHFSSDANDPQRNLLYVAMTRASKRLWVLESS
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgaacctgcagcccaggctgtaccccggccttgaccagaaccaggcactcaacagcgaa
gcgtcgtcgctgctcatccgcgccctggccggcacgggcaagacgaccacgctggccatc
aaggccgtcgacctgatccgcacccagggcgcgcgcaaggtgctgatgctggcctactcc
gaggccggcatcaaggccattcaggcacgcctggaccggctcaccgccgtccacctcgaa
ggcctgcacctgctcactctggagcagttttgcgcccgcctactcgaagagcagggcgac
cccgtgcccatgctctcctctgccctggagaagaacctgctcatccagcaggcgcatgag
gcgctgttgcaagaggccgaacggcatgccgagctcgacatccccgagctgtccgactat
ttcgcacgcccgctggacatcagcgccttcctcgccttcgaggcccaggccaagcagcgc
atgctggaactcgacatcgacgccagcggcctcggagcgctggcatattgccgcgacaac
gctctggactacggcctgtaccggctgctgcgcagctatgagcggctgcgctcgggcccc
acccaggagccgctgttctatgcacccggcgactgcacctacgcgctggcctgccagctg
gccgcactggacttcgatgccggctttacgctgctgcagggccgcttcgaggccgtgctg
ttcgacgagctgcaggacctggacgaggcagcgctgctggtgctgcggcatctggcacgc
ggcaacggccgcttcatcggtgtcggcgacttcaaccagcacattctgccgggcgcttcc
tccatctttggcgacagcgcccaacgcatactgcaggagctgcccgcaggcaccggccag
gccacgctcaacaccacctatcgcttcggccccctcatctgccaggaactgaaccgtctc
ttcggcgtggagttcgaagcccattaccgcaatgcctcggcctggttcgaacatcgccgt
ggcgatgatgaggactgcgcgcggcagttgctggacatccatgccaccgtggcccgtctg
ccccgcaaaccgcaggacccgcccgccgtgctgcgcgtcatcctgcgctcgcccgaagat
tcgatacggcttgaatggctgttcgcccacgaaggcgtgcactatgcctgcaaaggcatg
cagcgtttctaccagcgccgtgaaatcgccctggtgctggccatgctgtgggccatgccc
ggctgcagcggtaccgcccggctctcgcaaggcattctgaacagcgccgccgaaggcctg
atgcgctatgtgcgccatgccagtccacctgaccgggatctgctggccaacggcctgttc
gacatgagtgcattgggcgaagccccgccggagtccgacacgctgcgcatcgcagccgaa
ctgatgggacggcagagtgccatgcgccgtttccttgccgtccagatcgcaccggactct
gccgctgcccgcttgctggcccttcccgccgagcagtgcgccgatgctggacagctgtgc
cgccatccgctgctgcagcagttctttgcccaggccgccatcagccgggaggagctgcgc
caatgcctggccagcctgcaagcgctgtcgcagatctgcgccgggcttaccgtcgatgaa
ttcctgggccgtctcagcctcatggtccagtcgagcatcgcacagcatcagcgccaggaa
aaacccagcctgcagctgctcacggtggagcgcagcaaaggccatgaatacgactatgtg
gccgtgcccttcgtccatgccaggcatttctcctccgatgcgaacgacccgcagcgcaat
ctgctctatgtcgccatgacccgcgccagcaagcggctgtgggtactggaaagcagctga
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