Comamonas testosteroni TK102: O987_26495
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Entry
O987_26495 CDS
T03218
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ctes
Comamonas testosteroni TK102
Pathway
ctes03420
Nucleotide excision repair
ctes03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ctes00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
O987_26495
03430 Mismatch repair
O987_26495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ctes03400
]
O987_26495
Enzymes [BR:
ctes01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
O987_26495
DNA repair and recombination proteins [BR:
ctes03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
O987_26495
MMR (mismatch excision repair)
Other MMR factors
O987_26495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
AAA_16
UvrD_C_2
DEAD
NACHT
FtsK_SpoIIIE
nSTAND3
SLFN-g3_helicase
AAA_25
AAA_29
ATPase
Motif
Other DBs
NCBI-ProteinID:
AIJ49365
UniProt:
A0A076PZS8
LinkDB
All DBs
Position
complement(5628244..5630004)
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AA seq
586 aa
AA seq
DB search
MNEPCKLRESVIACEGHALVIGGPGSGKTTLALRKAVKRIRDGMLPGQSALFLSFSRAAV
ARILDAAKLESTKAEQEQLSIQTFHSFFWDILKPHAYLLGAPHRLSILLPHDEKALSGGL
GDEDDGWDEWLVERERLFREEGRIAFDLFAANATALLARSSHLLASIAHRHPIIIVDEAQ
DTGPYAWQCIQMLAPHTQVLCLADLEQQIFDYLPGVGPERVIAIREALKPHEIDLGTQNH
RSSDSEILAFGNDILTAKPRGAPYKGVSALAYRPEKPPPNWNHLLRRALGELLKSIRAQS
DKTVETIAILVTNNRSALKMSNALNALGANVGKPVRHKLLFDEAEALLSARFAAFLLEPK
DLAKLEADVVTSMEMIAAARRATGQGRKEVAKLLEQANKIKGGKVLNINIANALRGLISG
LAVNDFSGDPAEDWLTVKHELRATNQDELTRVAAQLDFLVAFRRGHRISAALSDEWLRDG
AYTNARTALDLALAQEQILDGVEPPMGLQVMNFHKAKGKQFDGVILVREARRTGPAVESS
FVWRGDTAPYPKSRRVLRVGITRAKVHTLILDPLWPQCPLLKGHKL
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgaacgagccgtgcaaactgcgtgaaagcgtcatagcttgcgaaggccatgccttggtc
atcggcggtcccggcagcggcaagacgacgctcgcgctgcgcaaggcggtcaagcggatt
cgcgacggcatgcttccgggtcagtctgccctgttcctgagcttctcgcgggcggcagtg
gcgcgcatcttggatgccgccaagcttgagtccaccaaagccgaacaggagcagctctcc
atccagacgttccattcgttcttctgggacatcctcaaaccccatgcctacctgcttggg
gcaccgcataggctctcgatcttgctgccacacgacgagaaggccctgtcgggcggcctc
ggcgacgaagacgatggctgggacgagtggctcgtcgagcgtgagcggctgtttcgcgaa
gaggggcggatcgcgttcgatctgttcgcggccaatgcgacagctctgttggctcgcagc
tcgcatcttttggcgtcgatcgcccatcggcatcccatcatcatcgtggacgaggcccag
gacaccggcccatacgcgtggcagtgcatccagatgctcgcgccacacacgcaggtgctg
tgcctggcagacctcgagcagcaaatcttcgactacctgccaggcgtcggcccggagcgc
gtgatcgccatccgggaggcattgaagccgcacgagatcgaccttgggacgcagaaccac
cgcagctcggactccgaaatcttggcgttcggcaatgacatcctgacggccaagccacgc
ggcgcgccttacaagggcgtttccgcccttgcctaccgccccgagaagccaccgccgaac
tggaatcatctgctgcgccgagccctcggagagctcttgaaatcaattcgggctcagagc
gacaagacggtggagacgatcgcgatactagtcaccaacaaccgcagtgcgttgaagatg
tccaacgccctcaacgcgttgggggccaatgtcgggaagccggttcggcacaagctgctg
ttcgacgaggccgaagcgctgctgtcagcccgtttcgcggcctttctgctggaacccaag
gacctcgccaaattggaggccgatgtcgtcaccagcatggaaatgatcgccgcagcgaga
cgcgcgacgggacagggcaggaaggaagtcgccaaactcttggagcaggccaacaaaatc
aagggtggcaaggtcttgaacatcaacatcgccaacgcgctgcgcggcctaatctcaggc
ttggcagtcaacgatttcagcggcgatcccgccgaggactggctcacggtcaaacatgag
ctgcgggcgaccaatcaagacgaactcacgcgggtcgctgcgcagttagacttcttggtg
gcattccgtcggggacatcgcatctcggctgccctctctgatgaatggcttcgagatggc
gcctacaccaatgcccgcaccgccctcgacttggctctcgcacaggagcaaatcctcgac
ggcgtggagccgccgatgggcttacaagtcatgaatttccacaaggccaagggcaagcag
ttcgatggagtcatcctcgtccgcgaagctcgccggaccggccccgccgttgaatcatct
ttcgtttggcgaggtgacactgctccgtatcccaaaagccgacgtgtgcttcgagtcggc
atcacgcgagcaaaagttcacacgctcatcctcgatccgctttggccgcaatgccccctg
ctcaaggggcacaagctctaa
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