Clostridium tetani 12124569: BN906_01378
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Entry
BN906_01378 CDS
T02905
Name
(GenBank) polynucleotide phosphorylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ctet
Clostridium tetani 12124569
Pathway
ctet03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ctet00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BN906_01378
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ctet03019
]
BN906_01378
03016 Transfer RNA biogenesis [BR:
ctet03016
]
BN906_01378
Enzymes [BR:
ctet01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
BN906_01378
Messenger RNA biogenesis [BR:
ctet03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BN906_01378
Transfer RNA biogenesis [BR:
ctet03016
]
Prokaryotic type
tRNA degradation factors
BN906_01378
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
PNPase
RNase_PH_C
KH_1
KH-I_KHDC4-BBP
KH_2
PCB_OB
Motif
Other DBs
NCBI-ProteinID:
CDI49379
LinkDB
All DBs
Position
1350068..1352185
Genome browser
AA seq
705 aa
AA seq
DB search
MSHVLETDIAGRTLKVEYGKVGMLSNCAILVSYGDTVVLINANASKEPRDGIDFFPLSVE
YEERLYSVGKIPGGFIKREGRPTENAILHARAIDRPLRPLFPKGYRNDVQIVCTVLSVES
DDQPDILAMNGASLALCLSSIPFATPVANVSVGLINGEFILNPTQSQREESILNLTVSAT
KERVMMIEAGAEEVDEDTMYNAIRFGFQQCQKIVEFQEEAMRRFGKEKVEPVLYLVDKEI
EKEVREFAFPMIKEAMYISDKDLRNEKIDEVKEKVKEEFKEKYPENGSDISEALYKMQKE
VVRNMILREKRRPDERAFDEIRKISCEVGLLPRTHGTGLFTRGLTQVMTAATIGPLADVQ
ILDSIEDEEFKRYMHHYNFPSYSVGETRPLRGPGRREIGHGALAEKALEPLIPSEEDFPY
TIRLVSEVLSSNGSTSQASVCGSTLALLDAGVPIKRPAAGIAMGLVTNDDLTEEEILTDI
QGIEDFFGDMDFKVAGTEKGITALQVDTKISGLSDNCIKETLIKAKDARMYILGKIKECI
PEHRAELSPYAPRVYTMTIAPEKIRDVIGAGGKTINKIIGETGVQIDIKEDGKIYVMSSD
SVGANRALKMINDLTKDVEAGEIYLGKVTRTTNFGAFVEILPGKEGLVHISKLDFTRVNK
VEDVVSVGDEILVKVTDIDDQGRINLSRRDAMKKEEDEKTKENNH
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgagtcacgtacttgaaactgatatagcaggaagaacccttaaagtagaatatggaaaa
gtaggaatgctttcgaattgtgctatattagtaagctatggagatacagtggtacttata
aatgcaaatgcgtctaaagaaccaagagatggaatagatttctttccattaagtgtagaa
tatgaggaaagactttattctgttggaaaaatacctggaggatttataaaaagagaggga
agacctacagagaatgctatattacatgctagggctatagatagacccctaagacctcta
ttcccaaaaggatatagaaatgatgttcaaatagtatgtactgtcctatctgtagaatct
gatgatcaaccagatatattagctatgaatggagcatctttagctctatgtctatctagc
ataccttttgctactccagtagctaatgtttccgtagggctaattaatggagagtttata
ttaaatccaactcaaagtcaaagagaagaaagtatcttaaatttaactgtttcagctaca
aaggaaagagttatgatgattgaagctggtgctgaagaagtagatgaagatactatgtat
aatgcaataagatttggtttccaacaatgtcaaaaaatagtggaattccaagaagaggca
atgagaagatttgggaaagaaaaagtagaaccagttttatacttagtggataaagaaata
gaaaaagaagtaagagaattcgcatttcctatgattaaagaagctatgtacatttcagat
aaagaccttagaaatgaaaaaatagatgaagtaaaagaaaaagtgaaagaggaatttaaa
gaaaagtatccagagaatggttcagatatttcagaagctttatataaaatgcaaaaagaa
gtagtaagaaatatgatacttagagaaaaaagacgtccagatgaaagggcttttgacgaa
ataagaaaaatcagctgtgaagtaggattacttccaaggactcatggtacaggactattt
acaagaggattaactcaagtaatgacagctgctaccattggacctttagcagatgtacaa
attcttgatagtatagaagatgaagaatttaaaagatatatgcatcactataacttccct
tcttacagtgtaggggaaactagacctttaagaggaccaggtagaagagaaataggtcat
ggggctttagcagaaaaagcattagaaccattaataccatctgaagaagatttcccatat
actataagacttgtatccgaagttttaagttcaaatggatctacatcacaggcaagtgtt
tgtgggagtacactagcattattagatgcaggtgtacctataaaaagaccagcagcagga
atagctatggggcttgttactaatgatgatttaacagaagaagaaattttaactgatata
caaggtatagaagacttttttggagatatggactttaaagttgcaggtacagaaaaagga
ataaccgctttacaagtagatacaaagataagtggattatcagacaactgtataaaagaa
accttaataaaagcaaaagatgctagaatgtatatattaggtaaaattaaagagtgtata
ccagagcacagagcagaactttcaccttatgcaccaagagtttatactatgactatagca
ccagaaaaaataagagatgtaataggtgctggtggtaaaacaataaataaaataataggt
gaaacaggagttcaaatagacataaaagaagatggaaaaatatatgttatgtcttctgat
agtgtaggagctaatagagctctaaagatgataaatgatttaactaaagatgtagaagca
ggagagatttatttaggtaaagttactagaacaaccaattttggggcttttgttgaaata
cttccaggaaaagaaggattagtacacatttcaaaattagactttacaagagtaaataag
gttgaagatgtggtttcagttggagatgaaatattagtaaaagtaacagatatagatgat
caaggaagaataaatctttcaagaagagatgcaatgaagaaagaagaagacgaaaaaact
aaagaaaataatcattaa
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