KEGG   Clostridium tetani 12124569: BN906_01400
Entry
BN906_01400       CDS       T02905                                 
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
ctet  Clostridium tetani 12124569
Pathway
ctet02024  Quorum sensing
ctet03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ctet00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BN906_01400 (hfq)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    BN906_01400 (hfq)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ctet03019]
    BN906_01400 (hfq)
   03036 Chromosome and associated proteins [BR:ctet03036]
    BN906_01400 (hfq)
Messenger RNA biogenesis [BR:ctet03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     BN906_01400 (hfq)
Chromosome and associated proteins [BR:ctet03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    BN906_01400 (hfq)
SSDB
Motif
Pfam: Hfq LSM Hfq_1
Other DBs
NCBI-ProteinID: CDI49401
LinkDB
Position
complement(1373837..1374076)
AA seq 79 aa
MAKTVNNLQDIFLNSARKNRIEVTIHLTNGFQIKGFVKGFDNFTVILDSLGKQMLIYKHA
ISTITPSKDILFTPQSTAE
NT seq 240 nt   +upstreamnt  +downstreamnt
ttggctaaaacggtaaacaatttacaagatatatttttaaatagtgctagaaagaataga
attgaagttacaatacatttaactaatggattccaaataaaaggatttgtaaaagggttt
gataacttcactgtaatattagattctttaggaaaacaaatgcttatatataagcatgca
atttccactattacacctagtaaagacatattatttactccacaatctacagcagaataa

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