Clostridium tetani 12124569: BN906_02195
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Entry
BN906_02195 CDS
T02905
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
ctet
Clostridium tetani 12124569
Pathway
ctet03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ctet00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BN906_02195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ctet03019
]
BN906_02195
03009 Ribosome biogenesis [BR:
ctet03009
]
BN906_02195
Enzymes [BR:
ctet01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BN906_02195
Messenger RNA biogenesis [BR:
ctet03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BN906_02195
Ribosome biogenesis [BR:
ctet03009
]
Prokaryotic type
rRNA helicases
BN906_02195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
NDK
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
CDI50183
LinkDB
All DBs
Position
2123034..2124608
Genome browser
AA seq
524 aa
AA seq
DB search
MENLKFNNLGLNEDILKAIEDMGFETPSKIQAEVIPIVLQGFDVIGQAQTGTGKTLAFGA
PVLNSISNESKKVKSIILAPTRELAIQVYKELTTVAKYTKFKLLPVYGGDSIDRQIKSLK
KGIDIVIGTPGRVQDLINRKALNLSHIEFLVLDEADEMLNMGFVDDIENILKSCNEDRRT
LLFSATMPSEIKKIAKKYMKKDAKHVAIAQNSMTVSSVEQFYYEVKQKNKFESLCKVLSV
DEPTRAIIFCKTKKGVDELVSSMKEKGFSAEGMHGDMTQSHRLNTLNRFKERTIPFLVAT
DVAARGIDVKDTSHVINYDLPQDTESYVHRIGRTGRANKKGTAYTFVTPKEFSSLKRIQK
ISKSKINKRQLPTMDDVLKAKFDSILNEVEQTLSKDNYNTFIPLVKDLESKFDLTNVTAA
LMSMLYNDEISYDYDDDNTESNSLDYTRIFLNVGRKDRLNPKILLEFLDNNANINKSQVG
SIDILDKFAFVDIATDRVGDLMDNCIDKTLCRRKLNIEVAKKSK
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatttaaaatttaataatttaggacttaatgaagatatactcaaagcaattgaa
gatatggggtttgaaactccttctaaaattcaagctgaggttataccaattgttttacaa
ggatttgatgttataggtcaggctcaaacaggtactggaaagacccttgccttcggtgct
cctgttttaaatagtattagtaatgaatctaaaaaagttaagagtataatactagctcct
acaagagaacttgctattcaggtatataaagagcttacaactgtagcaaaatacactaaa
ttcaaattgttacctgtatacggaggagattccatagacagacagataaaaagcttaaaa
aaaggaatagatattgtaataggtactcctggaagagttcaagatttaatcaatagaaaa
gctcttaatctatctcatattgaatttcttgttcttgatgaggctgatgaaatgcttaat
atgggctttgtagatgacatagaaaatatactaaaaagttgtaatgaagatagacgtact
ttattattttctgcaacaatgccaagtgaaataaagaagatagctaaaaagtatatgaaa
aaagatgctaagcatgtagctatagctcaaaattctatgacagtatcttctgttgaacaa
ttttattatgaagttaaacaaaaaaacaaatttgaatctttatgcaaagtactttctgtt
gacgaaccaactagagctataatattttgcaaaactaaaaaaggcgtagatgaattagta
tcatctatgaaagaaaaaggttttagcgcagagggaatgcacggtgatatgactcaaagt
catagattaaatactttgaatagatttaaagaaagaaccattcctttccttgtagccact
gatgtagctgcaagaggtatagatgttaaggatacaagtcatgttataaactatgattta
cctcaagatacagaatcctatgttcacagaattggtaggacaggaagagctaataaaaaa
ggtacagcatatacttttgttacacctaaagagtttagttctcttaaaagaatacaaaaa
ataagtaaaagtaaaataaataaaagacaattacctactatggatgatgtactaaaagct
aaatttgatagtatattaaatgaagtagaacaaactttatctaaggataattataatact
tttatacctttggttaaagatttagaaagtaaatttgatctaacaaatgttactgctgct
ttaatgagtatgttatataatgatgaaatttcttatgattatgacgacgataatacagaa
tcaaattccttagactacactagaatattcttaaatgtaggtcgtaaggatagacttaat
cctaaaattctattagagtttttagataataatgctaatataaataaaagccaagttgga
agtatagatatattagataaatttgcttttgtagatatagcaacagatcgtgtcggtgat
ttaatggataactgcatagataaaacattatgtagaagaaaattaaacatagaagtggct
aaaaaatctaaataa
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