Clostridium tetani 12124569: BN906_02631
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Entry
BN906_02631 CDS
T02905
Name
(GenBank) helicase domain-containing protein
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
ctet
Clostridium tetani 12124569
Pathway
ctet03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ctet00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BN906_02631
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ctet03019
]
BN906_02631
03400 DNA repair and recombination proteins [BR:
ctet03400
]
BN906_02631
Enzymes [BR:
ctet01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BN906_02631
Messenger RNA biogenesis [BR:
ctet03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BN906_02631
DNA repair and recombination proteins [BR:
ctet03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BN906_02631
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
ResIII
Cas3-like_C_2
T2SSE
DUF5774
Motif
Other DBs
NCBI-ProteinID:
CDI50597
LinkDB
All DBs
Position
complement(2539492..2542824)
Genome browser
AA seq
1110 aa
AA seq
DB search
MLDRMKNLLKSIEKESNKKTIVAFKGFPYSKLIGLDNKYFAQWPKIIINQTDIEDLKTQV
LYNTFEVMNSENKVFWMTYEELIIAYETIKNNFDIKVIENNIFNKKFPHDDTIDNIKKVY
ESYFYNVEEEIKDEEALEYSTIIDFYGDISYSNESGKYYVTYNDSLTRKLEYIDLYEIEE
NKYNVGMADMKLKATNTLFLELSEDETPFLDLITDLLSSKNLPKKVCIITMVQLSDLPNL
YRERTEILQKLFMGKIEFYFAMKTMEASDIENLPEYLSILKEYWGYNSFRTLDIYIDIRS
REREIMEISQAQIIDDVVTQTSLALDEKSYRDIFITSPTGSGKSVMFQLPSIYLSKKYKE
LKPLTIVISPLIALMNDQVNSLKKNGIDIARTINSNTLPFEREKILEEVEEGICSILYLS
PETLQARYDIKTLIGSRYLGLVIIDEAHIVTTWGKTFRADYWYLGIFLQKLRKAYRFPIV
TFTATAIYGGREDMYLETRDSLNMINPISYFGKVKRDDIYMMISSLGDVDKDFTKNSRDY
RKTKHQLALDHLEHAYRNNQKSLIYFPTIKTLRDFGSFIRQNNVEIYEKTGQYHGMLEKE
EKDEVLKSFKDGDMLFVLATKAFGMGVDIPDIKYVYHYAPTGSVTDYIQEIGRVARDKEL
VKKGVASCDFLPRDFNEVNRLHGMSSIRNNQLLQIMDKIVQLYKEKGFNRNLLVRAEDFK
YAFMDDNEERDGLENKIKTALLLIEKDFSSPSNIGYPPFVARPRSIFGNEMILAKKELVN
RLMSSSIKKYIKLEYPLKNSIFYGIYSVNLSDLWEEHYKNYTFPNFKRILFTPDECKKLK
HGNLLSQFSYSTGIATIKMTDNEINDAISTFNKYIKIFSDFSAEKKRLDKYFTANELGSY
LAIHLKIKDKFKARSIAQALINSCFEYQKIKDYRFIRERAEAQEIMYKYQNSYDIFIDFL
AVSFENYFKTKEQYYEDEDQFIKFYLRNNSSQFNYDAIVLGLAEAIGLVNYTIENGNSPQ
IYLRINSILPMEQAIKKGEFYKNNLLNNIYLRHKISVEMLTYLFTYKVKANTPQEKIVKY
TDFLWNKIEDYFLGYIPTEVEDKLYKNKNS
NT seq
3333 nt
NT seq
+upstream
nt +downstream
nt
atgttagatagaatgaaaaacttgttaaaatcaattgagaaggaatcaaacaagaaaaca
atagttgcttttaaaggttttccatattccaagttaatagggttagataataaatacttt
gcacaatggcctaagataattataaatcagacagatattgaagatttaaaaacacaagta
ctatacaatacttttgaagttatgaatagtgagaacaaggttttttggatgacatatgag
gagcttattattgcatatgaaacgataaaaaacaattttgatataaaagttattgagaat
aatatttttaacaaaaaatttccccatgatgatactattgataacataaagaaggtttat
gaaagttatttttataatgtcgaagaagaaataaaagatgaagaggctctggaatattca
acaataattgacttttatggtgatatatcatattcaaatgaaagtggtaaatactatgtg
acatataatgattccttgactaggaaacttgaatatatagatttatatgaaattgaggaa
aataaatataatgttggaatggctgacatgaagcttaaggctacgaatacattgtttcta
gaactttcagaagatgagactccttttttagacctaattactgatttactatctagcaaa
aacttaccaaaaaaagtatgtataattaccatggtccaattatcagacctacccaattta
tatagggaaagaactgaaatattgcaaaaattatttatggggaaaatagaattttatttt
gctatgaaaacaatggaagcttctgacatagaaaatcttccagagtatttatccatatta
aaggagtactggggttacaattcgttcagaactttagatatatatatagatattagaagc
agggaaagagaaataatggaaatatctcaagctcaaataattgatgatgttgtaacacaa
acatccttagccttggatgaaaaaagctatagggatatttttattacttcacctactggt
tctggaaaatctgtaatgtttcaattaccatcaatatatctgtcaaagaaatataaggag
ctaaaacctcttacaatagttatttcacccctgatagctttgatgaatgaccaagtaaac
tcattaaaaaagaatggaattgatattgctagaactataaattctaacaccttacctttc
gaaagggagaaaattttagaagaagttgaggaagggatatgctctatattatacttatct
ccagaaacactacaagcaagatatgatattaagaccttaataggtagtagatatctaggt
ttagtcattatagatgaagcccatattgttacaacttgggggaaaacttttagggcagat
tattggtatcttggtattttcctacagaaactacgcaaggcctatcgctttcctatagtt
acgtttacagctactgcgatttatggtggaagagaggatatgtatttggaaaccagagac
agcttgaatatgatcaatccaatttcttattttggtaaagttaagcgagatgatatttat
atgatgatatcttctttaggcgatgtggataaggattttactaagaacagtagagactat
agaaaaactaaacaccagctagcattagatcatttagaacatgcatatagaaataaccaa
aagtcattaatatactttccaactataaaaactttaagggactttggttcttttataagg
caaaataatgtggaaatttatgaaaaaactggacaatatcatggaatgctagaaaaagaa
gagaaagatgaggtactcaaaagctttaaagatggagatatgctttttgttttagctaca
aaagcttttgggatgggtgtagatataccagatattaagtatgtatatcactacgcaccc
actggaagtgttactgactatattcaagaaataggtcgagtagcaagggataaggaatta
gtaaaaaagggtgtagcaagttgtgattttttacctagagattttaatgaagttaataga
ttacacgggatgagtagtataaggaataatcagttgttacaaataatggataaaatagtt
caactctacaaggaaaaaggttttaatcgtaacttattagtaagagctgaagatttcaag
tatgcttttatggatgacaatgaagagagagatggtttagagaacaagataaaaacagcc
ctattattaatcgaaaaggatttttcatctcctagtaatattggctatccaccttttgta
gctagaccaaggagtatctttggaaatgaaatgatattggcaaaaaaggaattagtaaat
aggttgatgtcttcttccataaaaaagtatataaaacttgaatatcctttgaaaaacagc
atattttatggaatttattcagtaaatctatctgatctttgggaagaacattataaaaat
tatacattcccaaattttaaaagaatcctctttactccagatgagtgtaagaagttaaaa
catgggaatttgttatcacagttttcctactctacaggtatagcgactattaaaatgact
gataatgaaataaatgatgcaatcagtacatttaataaatatataaaaatattttcggat
ttttcggcagaaaaaaagagattggataaatattttacagctaatgaattggggagttat
ttagctatacacttaaaaattaaagataaatttaaggctaggtcaatagcccaagcttta
attaatagttgttttgaataccaaaaaataaaagactatagatttataagagagagagcc
gaagctcaagagattatgtacaagtatcagaatagctatgatatatttatagattttctt
gcagtaagctttgaaaactactttaagacaaaggaacaatattacgaggatgaggatcaa
tttataaaattttatttaagaaataacagctcacaatttaattatgatgcaattgtacta
ggtcttgctgaagctataggattggtaaactatactattgaaaatggcaatagcccacag
atatatttaagaattaactctattttacctatggaacaggccattaaaaaaggtgaattt
tataaaaacaacctattaaacaatatatatttaagacataaaattagtgttgagatgttg
acatacctatttacttataaagtaaaagctaacactccacaagaaaagatagtaaaatat
actgattttctctggaataaaatagaagattattttttaggctatataccgactgaggtt
gaagataagctttataagaataaaaactcgtaa
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