Comamonas terrigena: CT3_02660
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Entry
CT3_02660 CDS
T09012
Name
(GenBank) DNA-directed RNA polymerase sigma-70 factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
ctez
Comamonas terrigena
Pathway
ctez02020
Two-component system
ctez02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ctez00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CT3_02660
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CT3_02660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ctez03021
]
CT3_02660
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
ctez02035
]
CT3_02660
Transcription machinery [BR:
ctez03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CT3_02660
Bacterial motility proteins [BR:
ctez02035
]
Flagellar system
Flagellar assembly proteins
Stator
CT3_02660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
UPF0122
Cas3_I-F_Cas2
GerE
HTH_23
Motif
Other DBs
NCBI-ProteinID:
BBL22811
LinkDB
All DBs
Position
298167..298931
Genome browser
AA seq
254 aa
AA seq
DB search
MLQQDTSASYGDAAALVAGGWAPADGLYSTAAVSPQQEQAVLTAYLPMVKRVVRQLASQA
GEVMDQNDMTQVGLMGLLEALRRYGAVDEAFAGYARQRVRGAILDELRRQDWRPRTVRQS
AHKARDAVRALRRQLGAEPTPAQIQQALGMDDEAYLAYEQAESAEAMASLDEMVGQGMDL
PSSAADPQHAVLQRHLLEQMLAQLNEREQRVIQLYYEFDLNLKEIAAVLELSEARVCQIN
KEALRKMRAALEGA
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgctgcagcaagacacctccgcttcgtatggcgacgctgccgcgctggtggccggaggc
tgggcaccagccgacgggctctacagcacggcagccgtgtcgccgcagcaggaacaggcg
gtgctgaccgcctacctgcccatggtcaagcgggtcgtgcgccagctggcctcgcaggcg
ggggaggtcatggaccagaacgatatgacccaggtgggtctgatgggcctgctggaggca
ttgcgtcgctacggtgcggtggacgaggcctttgccggctatgcccgccagcgggtgcgc
ggggccattctggatgaactgcggcgccaggactggcgtccgcgcacggtgcgccagagt
gcccacaaggcacgggatgcggtgcgcgccctgcgccgtcagctgggggcggagcccacg
ccggcacagattcagcaggccctgggcatggacgacgaggcctacctggcatacgaacag
gccgagtctgcggaggccatggccagtctggatgaaatggtcggtcagggcatggacctg
cccagttcggcggcagacccccagcacgcggtgctgcagcgccatctgctggagcagatg
ctggcgcagctgaacgagcgggaacagcgcgtcatccagctctattacgaattcgacctc
aacctcaaggaaattgcagcggtgctggagttgtccgaggcgcgggtctgtcagatcaac
aaggaagcgctgcgcaagatgcgtgcagcgctggagggggcgtaa
DBGET
integrated database retrieval system
