Comamonas terrigena: CT3_06280
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Entry
CT3_06280 CDS
T09012
Symbol
foxI
Name
(GenBank) ECF sigma factor FoxI
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
ctez
Comamonas terrigena
Pathway
ctez02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ctez00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CT3_06280 (foxI)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ctez03021
]
CT3_06280 (foxI)
Transcription machinery [BR:
ctez03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CT3_06280 (foxI)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
PhyR_sigma-like
P5CR_dimer
Motif
Other DBs
NCBI-ProteinID:
BBL23173
LinkDB
All DBs
Position
718053..718607
Genome browser
AA seq
184 aa
AA seq
DB search
MSSASSPLHADINALYIDHHNWLHGWLRRRLGSAAEAADLAHDTFVRLLTGRTERCFTHP
AEARAYLKTTAQNLCINLWRRQEIERAWLEILATSPEASYPSAERQAMVLQALEEVGRML
QSLSPKAARAFTLAVVCDMTDDEVGAELGVSGRMVRKYVAQAMLGCLTLAARQTAAELRH
EPLP
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atgtcatccgcctccagccccttgcacgctgacatcaacgcgctgtacatcgaccaccac
aactggctccatggctggctccgccggcgcttggggtcggcggcagaggcagccgatctg
gcccacgacacctttgtgcgattgctgacaggccggacggagcgctgtttcacccatccc
gccgaggcccgtgcctacctgaaaaccacggcacagaatctgtgcatcaatctgtggcgc
cggcaggagatcgagcgggcctggctggaaatcctggcaacaagccctgaggcctcctat
ccgtccgcagagcgccaggccatggtgctgcaggcgctggaagaggtcgggcgcatgctc
cagtcgctgtcgcccaaggcggcccgcgctttcacgctggccgtggtctgcgacatgacc
gatgatgaagtgggcgccgagctgggcgtttccggacggatggtccgcaagtatgtggcg
caggccatgctgggctgtctgacgctggcggcgcgccagaccgccgcggagctgcggcac
gagcccctgccttga
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