KEGG   Comamonas terrigena: CT3_06280
Entry
CT3_06280         CDS       T09012                                 
Symbol
foxI
Name
(GenBank) ECF sigma factor FoxI
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
ctez  Comamonas terrigena
Pathway
ctez02020  Two-component system
Brite
KEGG Orthology (KO) [BR:ctez00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    CT3_06280 (foxI)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ctez03021]
    CT3_06280 (foxI)
Transcription machinery [BR:ctez03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     CT3_06280 (foxI)
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4_2 Sigma70_r4 Sigma70_ECF PhyR_sigma-like P5CR_dimer
Other DBs
NCBI-ProteinID: BBL23173
LinkDB
Position
718053..718607
AA seq 184 aa
MSSASSPLHADINALYIDHHNWLHGWLRRRLGSAAEAADLAHDTFVRLLTGRTERCFTHP
AEARAYLKTTAQNLCINLWRRQEIERAWLEILATSPEASYPSAERQAMVLQALEEVGRML
QSLSPKAARAFTLAVVCDMTDDEVGAELGVSGRMVRKYVAQAMLGCLTLAARQTAAELRH
EPLP
NT seq 555 nt   +upstreamnt  +downstreamnt
atgtcatccgcctccagccccttgcacgctgacatcaacgcgctgtacatcgaccaccac
aactggctccatggctggctccgccggcgcttggggtcggcggcagaggcagccgatctg
gcccacgacacctttgtgcgattgctgacaggccggacggagcgctgtttcacccatccc
gccgaggcccgtgcctacctgaaaaccacggcacagaatctgtgcatcaatctgtggcgc
cggcaggagatcgagcgggcctggctggaaatcctggcaacaagccctgaggcctcctat
ccgtccgcagagcgccaggccatggtgctgcaggcgctggaagaggtcgggcgcatgctc
cagtcgctgtcgcccaaggcggcccgcgctttcacgctggccgtggtctgcgacatgacc
gatgatgaagtgggcgccgagctgggcgtttccggacggatggtccgcaagtatgtggcg
caggccatgctgggctgtctgacgctggcggcgcgccagaccgccgcggagctgcggcac
gagcccctgccttga

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