Comamonas terrigena: CT3_09810
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Entry
CT3_09810 CDS
T09012
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
ctez
Comamonas terrigena
Brite
KEGG Orthology (KO) [BR:
ctez00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ctez03021
]
CT3_09810 (rpoH)
Transcription machinery [BR:
ctez03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CT3_09810 (rpoH)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
DUF2390
HTH_3
UCR_14kD
Motif
Other DBs
NCBI-ProteinID:
BBL23526
LinkDB
All DBs
Position
complement(1097858..1098808)
Genome browser
AA seq
316 aa
AA seq
DB search
MTTRTGTLTAATALAPANPWALVPPLGNLDAYISAVNRLPMLTQEEEQDYARKLKEHNDL
DAAGRLIMSHLRLVVSISRQYMGYGLPHSDLIQEGNVGLMKAVKRFDPDQNVRLVSYAMH
WIKAEIHEYILKNWRMVKVATTKAQRKLFFNLRSMKQELKADAAIETGDNTFRDTLTAQE
IDSVAAKLNVKREEVMEMETRLSGGDVLLDPSPSDDDDKAFGPISYLTDGAHEPTAMIES
RQRDVMATDGIAQALEALDDRSRHIVEERWLKVNDDGSGGMTLHELAAVYGVSAERIRQI
EVAAMKKMKKALAEFA
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgactacacggacgggcaccctcacggctgcgacggctctggcacctgcgaatccttgg
gctctggtgccgccgctgggcaatctggatgcttacatctccgctgtaaaccgcctgccc
atgctcacccaggaggaagagcaggactatgcgcgcaagctcaaagaacacaacgacctg
gatgccgccgggcgcctgatcatgtcccatctgcgcctggtggtttccatctcgcgccag
tacatgggctatggcctgccccatagcgacctgatccaggaaggcaatgtgggcctgatg
aaggcggtcaagcgtttcgaccccgaccagaacgtgcgtctggtcagctacgccatgcac
tggatcaaggccgagatccacgagtacatcctgaagaactggcgcatggtgaaggtggcc
accaccaaggcccagcgcaagctgttcttcaacctgcgctcgatgaagcaggagctcaag
gccgatgccgccattgaaaccggcgacaacaccttccgcgacaccctgaccgcacaggag
atcgactccgtcgccgctaagctgaatgtgaagcgcgaggaagtgatggagatggaaacc
cgcctgtcggggggtgacgtgctgctggacccttcgcccagcgacgatgatgacaaggct
ttcggccccatctcctacctgaccgacggcgcccacgagcccacggccatgatcgaatcg
cgccagcgcgatgtgatggccaccgacggcattgcccaggcgctggaagcgctggacgac
cgcagccgccacattgtggaagagcgctggctgaaggtgaacgatgacggctccggcggc
atgacgctgcatgagctggcagccgtgtacggcgtgagcgccgaacgcatccgccagatc
gaagtggccgccatgaagaaaatgaagaaggcgctggccgagtttgcataa
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