Comamonas terrigena: CT3_10680
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Entry
CT3_10680 CDS
T09012
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ctez
Comamonas terrigena
Pathway
ctez03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ctez00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CT3_10680 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ctez03019
]
CT3_10680 (pnp)
03016 Transfer RNA biogenesis [BR:
ctez03016
]
CT3_10680 (pnp)
Enzymes [BR:
ctez01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
CT3_10680 (pnp)
Messenger RNA biogenesis [BR:
ctez03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CT3_10680 (pnp)
Transfer RNA biogenesis [BR:
ctez03016
]
Prokaryotic type
tRNA degradation factors
CT3_10680 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
S1_RRP5
KH_2
OB_RRP5_4th
KH_KhpA-B
DUF5813
KH-I_KHDC4-BBP
aRib
Motif
Other DBs
NCBI-ProteinID:
BBL23613
LinkDB
All DBs
Position
1183685..1185946
Genome browser
AA seq
753 aa
AA seq
DB search
MTMFNKVTKTFQWGQHTVTMETGEIARQASGAVLVNIDDTVVLATVVGSKIAKAGQDFFP
LTVDYIEKTYAAGKIPGSFFKREAKPSELETLTSRLIDRPIRPLFPEGFFNDVHVVIHTI
SLNPEVDADIAAMIAVSAALSVSGIPFNGPIGAARVGYINGEYVLNPGQTLRKDSQMDLV
VAGTESAVLMVESEALQLPEEVMLGAVMFGHEQGKIAIDAIHELVREGGKPAWEWTAPAK
DDALIAKVAELGEAKLRDAYQLRNKQARTHACRLAYADVKAGLTEQGIAFDGVKVEGMLF
DIEARIVRSQILAGEPRIDGRDTRTVRPIEIRNSVLPRTHGSALFTRGETQALVISTLGT
ERDAQRIDALAGEFEDRFLFHYNMPPFATGEVGRMGSTKRREIGHGRLAKRALAACLPTK
EEFPYTIRVVSEITESNGSSSMASVCGGCLSMMDAGVPMKAHVAGIAMGLIKEDNRFAVL
TDILGDEDHLGDMDFKVAGTTNGITALQMDIKIQGITKEIMQVALAQAKEARMHILGKMQ
EAMGEAKTEVSSFAPKLYTMKINPEKIRDVIGKGGATIRALTEETGTQINIEEDGTITIA
ATDGAKAEAAKLRIEQITAEVEIGKVYEGPVVKILDFGALVNLLPGKDGLLHISQIAHER
VEKVTDYLQEGQVVQVKVLETDDKGRVKLSMKALTERPAGMERSERPAPAERGDRAPRQP
REFREPREPREPRQPRDPAVDADQQQQQQQQQQ
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atgacgatgttcaacaaagtcaccaagaccttccaatggggccagcacacggtcaccatg
gaaaccggcgaaatcgcccgccaggcctccggcgccgtgctggtcaacatcgatgacacc
gtggtgctggccaccgtggtgggttcgaagatcgccaaggccggtcaggacttcttccct
ctgaccgtcgactacatcgagaagacctacgccgccggcaagatccccggcagcttcttc
aagcgtgaagccaagccttccgagctggaaaccctgaccagccgcctgatcgaccgcccg
atccgtccgctgttccccgaaggtttcttcaacgatgtgcacgtggtcatccacacgatc
tcgctgaaccccgaagtggatgccgacatcgccgccatgatcgctgtgtccgccgccctg
tcggtgtcgggcatcccgttcaacggccccatcggcgccgcccgcgtgggttacatcaat
ggtgaatacgtgctgaaccccggccagaccctgcgcaaggattcgcagatggatctggtg
gtggccggtaccgaatccgctgtgctgatggtggagtccgaagccctgcaactgccggaa
gaagtgatgctgggcgccgtgatgttcggtcacgagcaaggcaagatcgccatcgacgcc
atccacgagctggtgcgcgaaggcggcaagcccgcctgggaatggaccgctcctgccaag
gacgacgccctgatcgccaaggtcgctgaactgggtgaagccaagctgcgcgatgcctac
cagctgcgcaacaagcaagcccgtacgcacgcctgccgtctggcctacgccgacgtgaag
gccggcctgaccgagcaaggcattgcattcgacggcgtcaaggtcgaaggcatgctgttc
gacatcgaagcccgtatcgtgcgttcgcagatcctggccggtgagccccgcatcgacggc
cgcgacacccgcaccgtgcgccccatcgagatccgcaactccgtgctgccccgcacccac
ggctcggccctgttcacacgtggtgaaacccaggccctggtgatctccaccctgggcacc
gagcgcgatgcccagcgcatcgacgcgctggctggcgagttcgaagaccgcttcctgttc
cactacaacatgcctccctttgccaccggtgaagtgggccgcatgggttcgaccaagcgc
cgcgaaatcggccacggccgtctggccaagcgtgctctggccgcttgcctgccgacgaag
gaagaattcccctacaccatccgcgtggtgtcggaaatcaccgaatccaacggctcctcg
tcgatggcatcggtgtgcggcggctgcctgtccatgatggacgccggcgtgcccatgaag
gcgcacgtggctggtatcgccatgggcctgatcaaggaagacaaccgcttcgccgtgctg
accgacatcctgggtgacgaagatcacctgggtgacatggacttcaaggtggccggtacc
accaacggcatcacggccctgcagatggacatcaagatccagggcattaccaaggaaatc
atgcaggttgccctggcccaggccaaggaagcgcgcatgcacatcctgggcaagatgcaa
gaggccatgggtgaagccaagaccgaagtctccagctttgctcccaagctgtacaccatg
aagatcaaccccgagaagatccgtgacgtgatcggcaagggcggcgccaccatccgtgcg
ctgaccgaagagaccggcacccagatcaatatcgaggaagacggcaccatcaccattgct
gccaccgacggcgccaaggccgaagccgccaagctgcgcatcgagcagatcacggccgaa
gttgaaatcggcaaggtctacgaaggtcccgtggtcaagatcctggacttcggcgcactg
gtcaacctgctgcccggcaaggacggtctgctgcacatcagccagatcgcccacgagcgc
gtggaaaaggtcaccgactacctgcaagaaggccaagtggtccaggtcaaggtgctggag
accgacgacaagggccgtgtcaagctgtccatgaaggcgctgaccgagcgtcccgccggc
atggagcgcagcgagcgtccggccccggccgagcgcggtgaccgtgctccccgccaaccg
cgcgagttccgtgaaccccgcgagccgcgtgagccccgccagccgcgtgacccggctgtc
gatgctgaccaacagcagcaacagcaacagcaacagcagtaa
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