Comamonas terrigena: CT3_13060
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Entry
CT3_13060 CDS
T09012
Name
(GenBank) pseudouridine synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
ctez
Comamonas terrigena
Brite
KEGG Orthology (KO) [BR:
ctez00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ctez03009
]
CT3_13060
Enzymes [BR:
ctez01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
CT3_13060
Ribosome biogenesis [BR:
ctez03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
CT3_13060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
BBL23851
LinkDB
All DBs
Position
1456082..1456816
Genome browser
AA seq
244 aa
AA seq
DB search
MQLQDILYSQGFGIRRVCSGLVQQGWVEVCVDGEMQRVTDSTLDLDTEGLKFRVQGVDWE
YHEKGYVLLYKPAGTECSQKPSAHPSIYTLLPMPLRQRPNKNAIQGLQAVGRLDQDTTGL
LLLSDDGQFIHRMSSPKKHVPKVYRVQAKHAVTAQMVERLLAGVVLDDDPKPVRAAACVQ
VDECTLDLTLTEGKYHQVKRMLAAVGNRVEGLHRWKIGGLELPATMEPGQWRWLTAADLE
LLRP
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgcagttgcaagatattctgtattcccagggctttggcattcgccgcgtgtgttctggg
ttggtgcagcaaggctgggttgaggtgtgtgtcgatggcgagatgcagcgcgtgaccgac
tccacgctggacctggatacggagggtttgaaattccgcgtgcagggcgtggactgggaa
taccatgaaaaaggctatgtgctgctgtacaagccggccggcacggaatgctcgcaaaag
ccttcggcccaccccagtatctataccttgctgccgatgccgctgcgccagcgaccgaac
aagaatgcgatccagggcctgcaggcggtggggcgcctggaccaggatacaacgggtttg
ctgctgctcagcgatgatggccagttcattcaccgcatgagttcgcccaaaaagcatgtg
cccaaggtctaccgggtgcaggccaaacatgcggtgacggcgcagatggtggagcgtctg
ctggccggtgtggtgctggacgatgaccccaagcctgtgcgggcggctgcctgtgtgcag
gtggatgaatgcacgctggatttgacgctgaccgaagggaaataccaccaggtcaagcgc
atgctggcggcggtgggcaaccgtgtggaaggcttgcatcgctggaagatcggcggtctg
gagctgccggcgacgatggagccggggcagtggcgctggttgacggccgccgacctggag
ctgctgcgcccttga
DBGET
integrated database retrieval system
