KEGG   Comamonas terrigena: CT3_15940
Entry
CT3_15940         CDS       T09012                                 
Symbol
femI_1
Name
(GenBank) ECF sigma factor FemI
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
ctez  Comamonas terrigena
Pathway
ctez02020  Two-component system
Brite
KEGG Orthology (KO) [BR:ctez00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    CT3_15940 (femI_1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ctez03021]
    CT3_15940 (femI_1)
Transcription machinery [BR:ctez03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     CT3_15940 (femI_1)
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_ECF Sigma70_r4 PhyR_sigma-like GerE HTH_23 HTH_40 Xre-like-HTH HTH_11 TnsD MarR Trp_repressor HTH_VMAP-M9
Other DBs
NCBI-ProteinID: BBL24139
LinkDB
Position
complement(1771758..1772282)
AA seq 174 aa
MSTPAHSIASEALGGMYTLHNRWLIAWLQRKLGDRHDAADIAQDTFTRIWSTARTQAIED
IREPRAYLTTVARRLMINHLERRSLEQAYLTSLQLLPEATTLSAEDRAILLETLEELDAL
LGELPAKVRTAFLLSQLEGLAYEEIAEQMQLSVRTVTRYMAQGFRQCLRVMWDA
NT seq 525 nt   +upstreamnt  +downstreamnt
gtgtccacccccgcccacagcatcgccagtgaagcacttggcggcatgtacacactgcac
aaccgctggttgattgcctggctgcaacgcaagctgggtgaccgccacgacgcagcggac
attgcacaggacaccttcacgcgcatctggagcacggccaggacccaggccattgaagac
attcgcgagcccagggcctatctcaccaccgtcgcccggcggctgatgatcaaccacctg
gaacgccgctcgctggaacaggcctatctcacctccttgcagctgctgcctgaagccacc
accctgtctgccgaagaccgggccatcctgctggagacgctggaagagctggatgccttg
ctgggcgaactgccggccaaggtgcgcacggcatttctgctctctcagcttgaaggtctg
gcttacgaggagattgccgagcagatgcagctgagcgtgcgcaccgtcacgcgctatatg
gcacaaggcttccggcaatgcctgcgcgtgatgtgggatgcgtga

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