Comamonas terrigena: CT3_16510
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Entry
CT3_16510 CDS
T09012
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ctez
Comamonas terrigena
Brite
KEGG Orthology (KO) [BR:
ctez00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ctez03016
]
CT3_16510 (truB)
Enzymes [BR:
ctez01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CT3_16510 (truB)
Transfer RNA biogenesis [BR:
ctez03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CT3_16510 (truB)
Prokaryotic type
CT3_16510 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
BBL24196
LinkDB
All DBs
Position
1833821..1834813
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AA seq
330 aa
AA seq
DB search
MNAPRTRVQRRPVHGVLLLDKPLGLSSNDALQKVKWLLRAEKAGHTGTLDPLASGVLPLC
FGAATKFSQLQLEAPKTYTAIARLGQTTTTADAEGAVLRERPVDLVSITPERLAAVQAQF
TGDIQQVPPMYSALKKDGKALYEYARAGVEIERPARAVTIHALKLALTQDEDGQPAIEMV
VTCSKGTYIRTLAEDVGEALGCGAHLRALRRTDTGGIDLARCVTLQALIDMPEAERMQHV
LPADTLLHAHVPVTLGEQDAGRFLSGLRRRGDWPDASAVAVYGDQPRALLGVGHVTSGEL
IPDRLLSPLEIQQILEGTPLHTERGSLETL
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcccctcgcacacgggtgcagcggcgccctgtgcatggggtgttgctgcttgac
aagccgctgggcctttccagcaatgacgctttgcagaaggtgaagtggttgttgcgcgcg
gaaaaggccggccataccggaaccctggaccccctggccagtggcgtgctgccgctgtgc
tttggtgcggccaccaagttcagccagctgcagctggaagcacccaagacctataccgcc
attgcccgcctggggcagaccacgaccacggccgatgccgagggcgcggtgctgcgcgag
cgtccggtggacctggtgtccatcacgcccgagcgtctggctgccgtgcaggcccagttc
actggcgacatccagcaggtgccgccgatgtacagcgccctgaagaaagacggcaaggcc
ttgtatgagtacgctcgcgcgggtgtggagatcgagcgcccggcgcgcgcggtcacgatc
cacgcactgaagctggcgctgacgcaggacgaggacggccagccggccattgaaatggtg
gtgacctgcagcaagggcacgtacatccgtacgctggccgaggatgtaggcgaggccctg
ggctgtggtgcgcatctgcgcgcgctgcgccgtaccgataccggtggcatcgatcttgca
cgctgcgtgacgctgcaggcgctgatcgatatgccggaggccgaacgcatgcagcatgtg
ctgcctgcggacacattgctgcatgcccatgtgcctgtcacattgggcgagcaagatgcc
ggacgtttcctgtccggcttgcgccgccgtggcgactggcccgatgccagtgccgtggcg
gtgtatggagaccaaccccgtgccctgttgggtgtggggcatgtcacaagcggggagctg
attcctgaccgcctgctcagtcccctggaaattcaacagattttggaaggcacgccgctg
cacacagagcgcggcagtttggaaactttatga
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