Comamonas terrigena: CT3_21790
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Entry
CT3_21790 CDS
T09012
Symbol
pbuA_1
Name
(GenBank) ligand-gated channel
KO
K16088
outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid
Organism
ctez
Comamonas terrigena
Brite
KEGG Orthology (KO) [BR:
ctez00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ctez02000
]
CT3_21790 (pbuA_1)
Transporters [BR:
ctez02000
]
Other transporters
Pores ion channels [TC:
1
]
CT3_21790 (pbuA_1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
STN
PASTA
DUF5525
Motif
Other DBs
NCBI-ProteinID:
BBL24724
LinkDB
All DBs
Position
2451018..2453444
Genome browser
AA seq
808 aa
AA seq
DB search
MSRFRFHLAPLAAAVTLLVATTAAQAQSGSTPAPQAAPVEIQITAQPLSQALAVLARQAH
LELMVQPALVEGRNAPAVQGRFTVREALNRLLAGSGLYAEVEGTSVVVRRQSPGPGAATL
PQVTVTAQEERSATSEGTNSFAARAVSINKGDQALKDIPQSISVITHKQIEEQGITDLKQ
AANIATGTVGVTGVGQGMVLAARGFQIDNWQYDGVAIPRNMYSLGNWAAEGMAFYDRLEV
LRGASGLLQGTGSPGGAVNLVRKRGQSEKTVTLTTRAGSWDRYGVQLDVGGPLNAEGTLR
GRAVVDEARSHSFVDYVNDRSRSLYAALDYDISPDTTVGLGVSQLDSKGRPFIYGVPLAA
DSRDVGLSRSTFTGASWNRSNLKQTTVYADLNHRFNADWKLKVSALQMNETSNSTHQRMH
GTVAPDGSGMTYADWITHFDSDKVGLDAFVNGSFNALGLRHEVTLGADYSKYQSDDKYTR
NFTSGGNLFDIDHNRPKPTEESLLAAGGRQSVSSYDVRQKGIYASWRAQLTEPLTAIVGA
RVAWYDLFYKASLFDTREAMHTSGEVVPYFGLVYALSPQWSAYGSYTSVFEPQSARTAAS
KVLDPVIGSNYELGIKGELMDKRVNTSLAVFRYDHKNRAVNDMASGFACDGWYCSTASGK
VRSQGLEAEVSGEVLRNLQLIAGYTFNTTKFLSDPDNQGKVFSTWTPKHMLRVWASYRHT
GDWNRLTTSAGFTTQSHTLDYDRANDIPGFTTWNMRFAYQATPEVSIAMNLNNIFDKRYI
VPGYTGYTGANYGDPRNVMFTVKYTPRF
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgtttccgattccatcttgcgccgctggcagcggccgtcaccctgctggtggcc
accaccgccgcccaggcgcaatcgggcagcacgcccgccccacaggctgcgccggtggaa
atccagatcaccgcgcaaccgctgtcgcaagcgctggcggtgctcgcacgccaggcgcac
ctggaattgatggtccagcccgccctggtcgaaggccgcaacgcccccgccgtgcaaggc
cgcttcaccgtgcgcgaagcgctcaatcgcctgctcgcaggcagcggcctgtacgccgaa
gtggaaggcacctcggtcgtggtgcggcgccagtcgcccggcccgggcgcagccacgctg
ccgcaggtgaccgtcaccgcccaggaagaacgcagcgccacctccgaaggcaccaactcc
ttcgccgcgcgtgcggtcagcatcaacaaaggtgaccaggcgctcaaggacatcccccag
tccatcagcgtgatcacgcacaagcagatcgaagaacagggcatcaccgacctcaagcag
gccgccaacatcgccaccggcaccgtcggcgtgaccggtgtcggacaaggcatggtgctg
gcagcgcgcggcttccagatcgacaactggcagtacgacggcgtcgcgatcccccgcaac
atgtactcgctcggcaactgggctgcagaaggcatggccttctacgaccggctggaagtc
ctgcgcggcgcatcgggcctgctgcaaggcaccggcagccccggcggggccgtcaacctc
gtgcgcaaacgcggccagagcgaaaagaccgtgacgctgaccacgcgcgccggttcctgg
gaccgctacggcgtgcagctggacgtcggtggccccctcaacgccgaaggcacgctgcgc
ggtcgtgccgtggtggacgaagcccgcagccactcgtttgtcgactatgtgaacgaccgt
tcccggtcgctgtatgcagcgctggactacgacatcagcccggataccaccgtgggcctg
ggcgtgagccagctcgacagcaagggacgccccttcatctacggcgtgcctctggcggct
gacagccgcgatgtgggtctgtcccgctccacgttcacgggtgcctcgtggaaccgttcc
aacctcaaacagaccacggtctacgccgatctgaaccaccgcttcaacgcagactggaag
ctcaaggtgtcggccttgcagatgaacgaaacgagcaactccacgcaccagcgcatgcac
ggcaccgtggcgccggacggcagcggaatgacctacgcggactggatcacccactttgac
tccgacaaggtcgggctggacgcttttgtgaatggcagcttcaatgccctgggcctgcgc
catgaagtgacgctgggcgccgattattccaagtaccagtccgacgacaagtacacccgc
aacttcacctcgggcggcaacctcttcgacatcgaccacaaccgccccaagcccaccgag
gaaagcctgctggcggccggtggccggcaatccgtctcctcctacgacgtgcggcaaaaa
ggcatctacgccagctggcgcgcacaactcaccgaaccgctgacagccatcgtgggtgcc
cgcgtcgcctggtatgacctgttctacaaggcatcgttgttcgacacccgtgaagccatg
cacacctcgggcgaggttgtcccctacttcggcctggtgtatgccctgagcccccagtgg
tcggcctacggcagctacaccagcgtgttcgagccccagtcggcacgcacggcggcaagc
aaggtgctggatcccgtcatcggatcgaactacgaactcggcatcaaaggcgagctgatg
gacaagcgcgtcaacacctcgctcgcggtgttccgctacgaccacaagaaccgtgccgtc
aacgacatggcatccggctttgcctgcgatggctggtactgctccacggcatccggcaag
gtccgcagccagggcctggaagccgaggtgagcggcgaggtgctgcgcaatctgcaactg
atcgcaggctacaccttcaacaccaccaaattcctgagcgaccccgacaaccagggcaag
gtcttcagcacctggacccccaagcacatgcttcgcgtctgggcgtcctaccgccacacc
ggcgactggaaccgcctcaccaccagcgccggtttcaccacgcaaagccacacgctcgac
tacgaccgcgcgaacgacattcccggcttcaccacctggaacatgcgattcgcctaccag
gccacacccgaggtcagcatcgcgatgaacctgaacaacatcttcgacaagcgctacatc
gtccctggctacaccggctacaccggcgccaactacggcgatccgcgcaatgtcatgttc
accgtgaaatacaccccgcgcttctga
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