Comamonas terrigena: CT3_25490
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Entry
CT3_25490 CDS
T09012
Symbol
nfxB
Name
(GenBank) HTH-type transcriptional regulator nfxB
KO
K18294
TetR/AcrR family transcriptional regulator, mexCD-oprJ operon repressor
Organism
ctez
Comamonas terrigena
Module
ctez_M00639
Multidrug resistance, efflux pump MexCD-OprJ
Brite
KEGG Orthology (KO) [BR:
ctez00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ctez03000
]
CT3_25490 (nfxB)
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
ctez01504
]
CT3_25490 (nfxB)
Transcription factors [BR:
ctez03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
CT3_25490 (nfxB)
Antimicrobial resistance genes [BR:
ctez01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexCD-OprJ [MD:
M00639
]
CT3_25490 (nfxB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_N
Xre-like-HTH
HTH_7
HTH_24
HTH_AsnC-type
HTH_IclR
HTH_23
HTH_6
HTH_26
HTH_10
HTH_31
HTH_17
HTH_3
HTH_11
HTH_Tnp_1_2
HTH_psq
TrmB
HTH_20
HTH_22
HTH_28
HTH_29
MarR
HTH_Tnp_1
TetR_C_29
Nuc_rec_co-act
Motif
Other DBs
NCBI-ProteinID:
BBL25094
LinkDB
All DBs
Position
complement(2857601..2858155)
Genome browser
AA seq
184 aa
AA seq
DB search
MTVSAPDDNRLLAALALALVQKPRASLQELAKAVGISKATLYRFCRTREELIDRLMAHGT
ALLHATADLVEIEEGSPIQVLPKLIAAQLEHRELMAFMIYYWRPDALDNPAQAAQWDEFT
HRMDAFFLRGQREGAFRIDISAAALSEAFGGLFCGLVDAERNGRVARTSIAPTLEALFLK
GASA
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtgtccgcaccggatgacaaccgtttgctcgccgccctggcgttggcgctggtg
cagaagccccgcgcttcgctgcaggaactggccaaggcggtgggcatcagcaaggccacg
ctctaccgcttctgccgcacgcgggaggagctgatcgaccggctgatggcgcacggcacg
gcgctgctgcacgccacggccgacctggtggagatcgaagagggctcgcccatccaggtg
ctgcccaagctcatcgcggcgcagctggaacaccgcgagctgatggcgttcatgatctat
tactggcggcccgatgcgctggacaacccggcccaagccgcgcagtgggacgagttcacc
caccgcatggacgccttcttcctgcgcggccagcgcgaaggcgcgtttcgcatcgacatc
tcggccgccgccctgagcgaagcctttggcggcctgttctgcggcctggtcgacgccgaa
cgcaatggccgcgtggcccgcaccagcatcgcgcccacgctggaagccctgttcctcaag
ggggcgtctgcgtga
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integrated database retrieval system
