Comamonas terrigena: CT3_30740
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Entry
CT3_30740 CDS
T09012
Name
(GenBank) transcriptional regulator
KO
K21703
LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
Organism
ctez
Comamonas terrigena
Brite
KEGG Orthology (KO) [BR:
ctez00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ctez03000
]
CT3_30740
Transcription factors [BR:
ctez03000
]
Prokaryotic type
Helix-turn-helix
LysR family
CT3_30740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
P22_Cro
HTH_30
MarR_2
HTH_28
PBP_like_2
HTH_5
HTH_20
HTH_50
MarR
HTH_23
HTH_Tnp_ISL3
YdaS_toxin
PBP_like
HTH_24
DUF2089
HTH_8
NUMOD1
Motif
Other DBs
NCBI-ProteinID:
BBL25619
LinkDB
All DBs
Position
3406046..3406897
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AA seq
283 aa
AA seq
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MSNARYRTFVAVAHHGSLSAAARALGVSQPTVSTQIAALERQSQVELFHRQGYRMALTTA
GSKLLSLAQRLLALESEAAFFLRDSGKLHQGELKLGAVGPFHVIEMVAAYRARYPGMQLS
IRMGNSQQVLHDLAHYSTDVAVLAGLYERPELLAREYARHAIILFAHVDHPLARHDEVDI
TALHGQPLLLREPGSTTRAAMEQALRAAGVQPRLGLEIGSREAIREAVARGLGIGAVSEA
EFIPDTRFTPIRIAGAPACTTTYLYCMQERSDSVLVRSFWDAV
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacgcccgctaccgcacttttgtggccgtggcccaccacggcagcctgagcgcc
gccgcacgcgcgctgggcgtgagccagcccacggtctccacccagattgccgcgctggag
cggcaaagccaggtggagctgttccaccgccagggctaccgcatggcgctgaccacggcc
ggcagcaagctgctgtcgctggcgcagcgcctgctggcgctggagtcggaagccgcgttc
tttctgcgcgattcaggcaagctgcaccagggtgagctgaagctgggcgcggttggccct
ttccatgtgatcgagatggtggcggcctaccgcgcgcgctaccccggcatgcagctgtcg
atccgcatgggcaattcacagcaggtgctgcacgacctggcgcactacagcaccgatgtg
gcggtgctggccggtctgtacgaacgccccgagctgctggcgcgcgaatatgcgcgccac
gccatcattctgtttgcccatgtggaccacccgctggcgcggcacgacgaggtggacatc
accgccctgcacggccagccgctgctgctgcgcgaacccggctccaccacccgtgcggcc
atggagcaggccttgcgcgccgccggggtgcagccccggctgggcctggaaatcggcagc
cgcgaagccatccgcgaggcggtggcgcgcggcctgggcattggcgcggtgtcggaggcg
gagttcattcccgatacgcgcttcacgcccatccgcattgcgggcgccccggcctgtacc
accacctatctgtactgcatgcaggagcgcagcgacagcgtgctggtacggtcgttctgg
gatgcggtgtaa
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